G-computation and machine learning for estimating the causal effects of binary exposure statuses on binary outcomes

被引:0
|
作者
Florent Le Borgne
Arthur Chatton
Maxime Léger
Rémi Lenain
Yohann Foucher
机构
[1] Nantes University,INSERM UMR 1246
[2] Tours University, SPHERE
[3] IDBC-A2COM,Département D’Anesthésie Réanimation
[4] Centre Hospitalier Universitaire D’Angers,undefined
[5] Lille University Hospital,undefined
[6] Nantes University Hospital,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
In clinical research, there is a growing interest in the use of propensity score-based methods to estimate causal effects. G-computation is an alternative because of its high statistical power. Machine learning is also increasingly used because of its possible robustness to model misspecification. In this paper, we aimed to propose an approach that combines machine learning and G-computation when both the outcome and the exposure status are binary and is able to deal with small samples. We evaluated the performances of several methods, including penalized logistic regressions, a neural network, a support vector machine, boosted classification and regression trees, and a super learner through simulations. We proposed six different scenarios characterised by various sample sizes, numbers of covariates and relationships between covariates, exposure statuses, and outcomes. We have also illustrated the application of these methods, in which they were used to estimate the efficacy of barbiturates prescribed during the first 24 h of an episode of intracranial hypertension. In the context of GC, for estimating the individual outcome probabilities in two counterfactual worlds, we reported that the super learner tended to outperform the other approaches in terms of both bias and variance, especially for small sample sizes. The support vector machine performed well, but its mean bias was slightly higher than that of the super learner. In the investigated scenarios, G-computation associated with the super learner was a performant method for drawing causal inferences, even from small sample sizes.
引用
收藏
相关论文
共 45 条
  • [1] G-computation and machine learning for estimating the causal effects of binary exposure statuses on binary outcomes
    Le Borgne, Florent
    Chatton, Arthur
    Leger, Maxime
    Lenain, Remi
    Foucher, Yohann
    [J]. SCIENTIFIC REPORTS, 2021, 11 (01)
  • [2] G-Computation Demonstration in Estimating Causal Effects with Time-Dependent Confounding
    Liu, Fuhao
    Shuai, Yongmin
    Zhang, Xin
    Xiong, Yunfei
    Zeng, Yong
    [J]. 2022 2ND IEEE INTERNATIONAL CONFERENCE ON SOFTWARE ENGINEERING AND ARTIFICIAL INTELLIGENCE (SEAI 2022), 2022, : 151 - 154
  • [3] gformula: Estimating causal effects in the presence of time-varying confounding or mediation using the g-computation formula
    Daniel, Rhian M.
    De Stavola, Bianca L.
    Cousens, Simon N.
    [J]. STATA JOURNAL, 2011, 11 (04): : 479 - 517
  • [4] Estimating the effect of plate discipline using a causal inference framework: an application of the G-computation algorithm
    Vock, David Michael
    Vock, Laura Frances Boehm
    [J]. JOURNAL OF QUANTITATIVE ANALYSIS IN SPORTS, 2018, 14 (02) : 37 - 56
  • [5] Using Ensemble-Based Methods for Directly Estimating Causal Effects: An Investigation of Tree-Based G-Computation
    Austin, Peter C.
    [J]. MULTIVARIATE BEHAVIORAL RESEARCH, 2012, 47 (01) : 115 - 135
  • [6] Estimating the causal effect of exercise adherence on weekly smoking cessation using the G-computation algorithm
    Dunsiger, Shira
    Hogan, Joseph W.
    Marcus, Bess H.
    [J]. ANNALS OF BEHAVIORAL MEDICINE, 2008, 35 : S183 - S183
  • [7] Causal vaccine effects on binary postinfection outcomes
    Hudgens, MG
    Halloran, ME
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2006, 101 (473) : 51 - 64
  • [8] A Bayesian approach to estimating causal vaccine effects on binary post-infection outcomes
    Zhou, Jincheng
    Chu, Haitao
    Hudgens, Michael G.
    Halloran, M. Elizabeth
    [J]. STATISTICS IN MEDICINE, 2016, 35 (01) : 53 - 64
  • [9] Discussion of 'Estimating time-varying causal excursion effects in mobile health with binary outcomes'
    Zhang, Y.
    Laber, E. B.
    [J]. BIOMETRIKA, 2021, 108 (03) : 535 - 539
  • [10] Rejoinder: 'Estimating time-varying causal excursion effects in mobile health with binary outcomes'
    Qian, Tianchen
    Yoo, Hyesun
    Klasnja, Predrag
    Almirall, Daniel
    Murphy, Susan A.
    [J]. BIOMETRIKA, 2021, 108 (03) : 551 - 555