LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia

被引：0
|
作者：
James G. Lefevre
Yvette W. H. Koh
Adam A. Wall
Nicholas D. Condon
Jennifer L. Stow
Nicholas A. Hamilton
机构：
[1] The University of Queensland,Institute for Molecular Bioscience
[2] The University of Queensland,Research Computing Centre
来源：
BMC Bioinformatics | / 22卷
关键词：
Machine learning; Semantic segmentation; High performance computing; Object detection and tracking; Macrophage; Ruffles; Filopodia;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 40 条
  • [1] LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia
    Lefevre, James G.
    Koh, Yvette W. H.
    Wall, Adam A.
    Condon, Nicholas D.
    Stow, Jennifer L.
    Hamilton, Nicholas A.
    [J]. BMC BIOINFORMATICS, 2021, 22 (01)
  • [2] 4D Catalysis Concept Enabled by Multilevel Data Collection and Machine Learning Analysis
    Galushko, Alexey S.
    Ananikov, Valentine P.
    [J]. ACS CATALYSIS, 2023, 14 (01) : 161 - 175
  • [3] Unsupervised machine learning combined with 4D scanning transmission electron microscopy for bimodal nanostructural analysis
    Kimoto, Koji
    Kikkawa, Jun
    Harano, Koji
    Cretu, Ovidiu
    Shibazaki, Yuki
    Uesugi, Fumihiko
    [J]. SCIENTIFIC REPORTS, 2024, 14 (01):
  • [4] Large-Scale Machine Learning and Optimization for Bioinformatics Data Analysis
    Cheng, Jianlin
    [J]. ACM-BCB 2020 - 11TH ACM CONFERENCE ON BIOINFORMATICS, COMPUTATIONAL BIOLOGY, AND HEALTH INFORMATICS, 2020,
  • [5] MimicME: A Large Scale Diverse 4D Database for Facial Expression Analysis
    Papaioannou, Athanasios
    Gecer, Baris
    Cheng, Shiyang
    Chrysos, Grigorios
    Deng, Jiankang
    Fotiadou, Eftychia
    Kampouris, Christos
    Kollias, Dimitrios
    Moschoglou, Stylianos
    Songsri-In, Kritaphat
    Ploumpis, Stylianos
    Trigeorgis, George
    Tzirakis, Panagiotis
    Ververas, Evangelos
    Zhou, Yuxiang
    Ponniah, Allan
    Roussos, Anastasios
    Zafeiriou, Stefanos
    [J]. COMPUTER VISION, ECCV 2022, PT VIII, 2022, 13668 : 467 - 484
  • [6] A hierarchical machine learning framework for the analysis of large scale animal movement data
    Torney, Colin J.
    Morales, Juan M.
    Husmeier, Dirk
    [J]. MOVEMENT ECOLOGY, 2021, 9 (01)
  • [7] A hierarchical machine learning framework for the analysis of large scale animal movement data
    Colin J. Torney
    Juan M. Morales
    Dirk Husmeier
    [J]. Movement Ecology, 9
  • [8] 4DFAB: A Large Scale 4D Database for Facial Expression Analysis and Biometric Applications
    Cheng, Shiyang
    Kotsia, Irene
    Pantic, Maja
    Zafeiriou, Stefanos
    [J]. 2018 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2018, : 5117 - 5126
  • [9] An online conjugate gradient algorithm for large-scale data analysis in machine learning
    Xue, Wei
    Wan, Pengcheng
    Li, Qiao
    Zhong, Ping
    Yu, Gaohang
    Tao, Tao
    [J]. AIMS MATHEMATICS, 2021, 6 (02): : 1515 - 1537
  • [10] Scalable and Robust Regression Methods for Phenome-Wide Association Analysis on Large-Scale Biobank Data
    Bi, Wenjian
    Lee, Seunggeun
    [J]. FRONTIERS IN GENETICS, 2021, 12
1234