An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging

被引:0
|
作者
Nazish Sayed
Yingxiang Huang
Khiem Nguyen
Zuzana Krejciova-Rajaniemi
Anissa P. Grawe
Tianxiang Gao
Robert Tibshirani
Trevor Hastie
Ayelet Alpert
Lu Cui
Tatiana Kuznetsova
Yael Rosenberg-Hasson
Rita Ostan
Daniela Monti
Benoit Lehallier
Shai S. Shen-Orr
Holden T. Maecker
Cornelia L. Dekker
Tony Wyss-Coray
Claudio Franceschi
Vladimir Jojic
François Haddad
José G. Montoya
Joseph C. Wu
Mark M. Davis
David Furman
机构
[1] Stanford University School of Medicine,Stanford 1000 Immunomes Project
[2] Stanford University School of Medicine,Stanford Cardiovascular Institute
[3] Stanford University School of Medicine,Department of Surgery, Division of Vascular Surgery
[4] Buck Artificial Intelligence Platform,Department of Computer Science
[5] the Buck Institute for Research on Aging,Department of Statistics and Department of Biomedical Data Science
[6] Edifice Health Inc.,Faculty of Medicine
[7] University of North Carolina,Department of Pathology
[8] Stanford University School of Medicine,Research Unit Hypertension and Cardiovascular Epidemiology, KU Leuven Department of Cardiovascular Sciences
[9] Technion,Human Immune Monitoring Center, Institute for Immunity, Transplantation and Infection
[10] Israel Institute of Technology,Interdepartmental Centre L. Galvani (CIG), Alma Mater Studiorum
[11] Stanford University School of Medicine,Department of Experimental Clinical and Biomedical Sciences, Mario Serio
[12] University of Leuven,Department of Neurology and Neurological Sciences
[13] Stanford University School of Medicine,Division of Pediatric Infectious Diseases
[14] University of Bologna,Institute for Immunity, Transplantation and Infection
[15] University of Florence,Paul F. Glenn Center for Aging Research
[16] Stanford School of Medicine,Institute of Information Technologies, Mathematics and Mechanics
[17] Stanford University School of Medicine,Department of Medicine
[18] Stanford University School of Medicine,Division of Cardiovascular Medicine
[19] Stanford University School of Medicine,Howard Hughes Medical Institute
[20] Lobachevsky University,Austral Institute for Applied Artificial Intelligence, Institute for Research in Translational Medicine (IIMT)
[21] Calico Life Sciences L.L.C,undefined
[22] Stanford University School of Medicine,undefined
[23] Stanford University School of Medicine,undefined
[24] Stanford University School of Medicine,undefined
[25] Universidad Austral,undefined
[26] CONICET,undefined
[27] Pilar,undefined
来源
Nature Aging | 2021年 / 1卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
While many diseases of aging have been linked to the immunological system, immune metrics capable of identifying the most at-risk individuals are lacking. From the blood immunome of 1,001 individuals aged 8–96 years, we developed a deep-learning method based on patterns of systemic age-related inflammation. The resulting inflammatory clock of aging (iAge) tracked with multimorbidity, immunosenescence, frailty and cardiovascular aging, and is also associated with exceptional longevity in centenarians. The strongest contributor to iAge was the chemokine CXCL9, which was involved in cardiac aging, adverse cardiac remodeling and poor vascular function. Furthermore, aging endothelial cells in human and mice show loss of function, cellular senescence and hallmark phenotypes of arterial stiffness, all of which are reversed by silencing CXCL9. In conclusion, we identify a key role of CXCL9 in age-related chronic inflammation and derive a metric for multimorbidity that can be utilized for the early detection of age-related clinical phenotypes.
引用
收藏
页码:598 / 615
页数:17
相关论文
共 42 条
  • [1] An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging
    Sayed, Nazish
    Huang, Yingxiang
    Nguyen, Khiem
    Krejciova-Rajaniemi, Zuzana
    Grawe, Anissa P.
    Gao, Tianxiang
    Tibshirani, Robert
    Hastie, Trevor
    Alpert, Ayelet
    Cui, Lu
    Kuznetsova, Tatiana
    Rosenberg-Hasson, Yael
    Ostan, Rita
    Monti, Daniela
    Lehallier, Benoit
    Shen-Orr, Shai S.
    Maecker, Holden T.
    Dekker, Cornelia L.
    Wyss-Coray, Tony
    Franceschi, Claudio
    Jojic, Vladimir
    Haddad, Francois
    Montoya, Jose G.
    Wu, Joseph C.
    Davis, Mark M.
    Furman, David
    [J]. NATURE AGING, 2021, 1 (07): : 598 - +
  • [2] Author Correction: An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging
    Nazish Sayed
    Yingxiang Huang
    Khiem Nguyen
    Zuzana Krejciova-Rajaniemi
    Anissa P. Grawe
    Tianxiang Gao
    Robert Tibshirani
    Trevor Hastie
    Ayelet Alpert
    Lu Cui
    Tatiana Kuznetsova
    Yael Rosenberg-Hasson
    Rita Ostan
    Daniela Monti
    Benoit Lehallier
    Shai S. Shen-Orr
    Holden T. Maecker
    Cornelia L. Dekker
    Tony Wyss-Coray
    Claudio Franceschi
    Vladimir Jojic
    François Haddad
    José G. Montoya
    Joseph C. Wu
    Mark M. Davis
    David Furman
    [J]. Nature Aging, 2021, 1 : 748 - 748
  • [4] An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging (vol 1, pg 598, 2021)
    Sayed, Nazish
    Huang, Yingxiang
    Nguyen, Khiem
    Krejciova-Rajaniemi, Zuzana
    Grawe, Anissa P.
    Gao, Tianxiang
    Tibshirani, Robert
    Hastie, Trevor
    Alpert, Ayelet
    Cui, Lu
    Kuznetsova, Tatiana
    Rosenberg-Hasson, Yael
    Ostan, Rita
    Monti, Daniela
    Lehallier, Benoit
    Shen-Orr, Shai S.
    Maecker, Holden T.
    Dekker, Cornelia L.
    Wyss-Coray, Tony
    Franceschi, Claudio
    Jojic, Vladimir
    Haddad, Francois
    Montoya, Jose G.
    Wu, Joseph C.
    Davis, Mark M.
    Furman, David
    [J]. NATURE AGING, 2021, 1 (08): : 748 - 748
  • [5] DeepMAge: A Methylation Aging Clock Developed with Deep Learning
    Galkin, Fedor
    Mamoshina, Polina
    Kochetov, Kirill
    Sidorenko, Denis
    Zhavoronkov, Alex
    [J]. AGING AND DISEASE, 2021, 12 (05): : 1252 - 1262
  • [6] Human Gut Microbiome Aging Clock Based on Taxonomic Profiling and Deep Learning
    Galkin, Fedor
    Mamoshina, Polina
    Aliper, Alex
    Putin, Evgeny
    Moskalev, Vladimir
    Gladyshev, Vadim N.
    Zhavoronkov, Alex
    [J]. ISCIENCE, 2020, 23 (06)
  • [7] INFLAMMATORY MULTIMORBIDITY AND THE RISK OF FRAILTY IN OLDER WOMEN: THE WOMEN'S HEALTH AND AGING STUDIES (WHAS) I AND II
    Chang, S.
    Weiss, C.
    Xue, Q.
    Fried, L.
    [J]. GERONTOLOGIST, 2008, 48 : 578 - 578
  • [8] Associations of Inflammatory, Metabolic, Malnutrition, and Frailty Indexes with Multimorbidity Incidence and Progression, and Mortality Impact: Singapore Longitudinal Aging Study
    Cheong, Chin Yee
    Yap, Philip
    Yap, Keng Bee
    Ng, Tze Pin
    [J]. GERONTOLOGY, 2023, 69 (04) : 416 - 427
  • [9] Longitudinal analysis on inflammatory markers and frailty progression: based on the English longitudinal study of aging
    He, Lingxiao
    Yang, Jinzhu
    Fang, Ya
    [J]. EUROPEAN GERIATRIC MEDICINE, 2024,
  • [10] Deep-learning based descriptors in application to aging problem in face recognition
    Boussaad, Leila
    Boucetta, Aldjia
    [J]. JOURNAL OF KING SAUD UNIVERSITY-COMPUTER AND INFORMATION SCIENCES, 2022, 34 (06) : 2975 - 2981