Gene Selection for Cancer Classification using Support Vector Machines

被引:351
|
作者
Isabelle Guyon
Jason Weston
Stephen Barnhill
Vladimir Vapnik
机构
[1] AT&T Labs,
来源
Machine Learning | 2002年 / 46卷
关键词
diagnosis; diagnostic tests; drug discovery; RNA expression; genomics; gene selection; DNA micro-array; proteomics; cancer classification; feature selection; support vector machines; recursive feature elimination;
D O I
暂无
中图分类号
学科分类号
摘要
DNA micro-arrays now permit scientists to screen thousands of genes simultaneously and determine whether those genes are active, hyperactive or silent in normal or cancerous tissue. Because these new micro-array devices generate bewildering amounts of raw data, new analytical methods must be developed to sort out whether cancer tissues have distinctive signatures of gene expression over normal tissues or other types of cancer tissues.
引用
收藏
页码:389 / 422
页数:33
相关论文
共 50 条
  • [1] Gene selection for cancer classification using support vector machines
    Guyon, I
    Weston, J
    Barnhill, S
    Vapnik, V
    MACHINE LEARNING, 2002, 46 (1-3) : 389 - 422
  • [2] Gene selection for cancer classification using bootstrapped genetic algorithms and support vector machines
    Chen, XW
    PROCEEDINGS OF THE 2003 IEEE BIOINFORMATICS CONFERENCE, 2003, : 504 - 505
  • [3] Gene selection and prediction for cancer classification using support vector machines with a reject option
    Choi, Hosik
    Yeo, Donghwa
    Kwon, Sunghoon
    Kim, Yongdai
    COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2011, 55 (05) : 1897 - 1908
  • [4] Hybrid Firefly based Simultaneous Gene Selection and Cancer Classification using Support Vector Machines and Random Forests
    Srivastava, Atulji
    Chakrabarti, Saurabh
    Das, Subrata
    Ghosh, Shameek
    Jayaraman, V. K.
    PROCEEDINGS OF SEVENTH INTERNATIONAL CONFERENCE ON BIO-INSPIRED COMPUTING: THEORIES AND APPLICATIONS (BIC-TA 2012), VOL 1, 2013, 201 : 485 - +
  • [5] Saliency analysis of support vector machines for gene selection in tissue classification
    Cao, L
    Seng, CK
    Gu, Q
    Lee, HP
    NEURAL COMPUTING & APPLICATIONS, 2003, 11 (3-4): : 244 - 249
  • [6] Saliency Analysis of Support Vector Machines for Gene Selection in Tissue Classification
    L. Cao
    H.P. Lee
    C.K. Seng
    Q. Gu
    Neural Computing & Applications, 2003, 11 : 244 - 249
  • [7] Hybrid huberized support vector machines for microarray classification and gene selection
    Wang, Li
    Zhu, Ji
    Zou, Hui
    BIOINFORMATICS, 2008, 24 (03) : 412 - 419
  • [8] Gene Classification Using Codon Usage and Support Vector Machines
    Ma, Jianmin
    Nguyen, Minh N.
    Rajapakse, Jagath C.
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2009, 6 (01) : 134 - 143
  • [9] Simultaneous Support Vector Selection and Parameter Optimization Using Support Vector Machines for Sentiment Classification
    Fei, Ye
    PROCEEDINGS OF 2016 IEEE 7TH INTERNATIONAL CONFERENCE ON SOFTWARE ENGINEERING AND SERVICE SCIENCE (ICSESS 2016), 2016, : 59 - 62
  • [10] Feature selection algorithm in classification learning using support vector machines
    Yu. V. Goncharov
    I. B. Muchnik
    L. V. Shvartser
    Computational Mathematics and Mathematical Physics, 2008, 48 : 1243 - 1260