Molecular epidemiology of Plasmodium falciparum by multiplexed amplicon deep sequencing in Senegal

被引:0
|
作者
Tolla Ndiaye
Mouhamad Sy
Amy Gaye
Katherine J. Siddle
Daniel J. Park
Amy K. Bei
Awa B. Deme
Aminata Mbaye
Baba Dieye
Yaye Die Ndiaye
Ibrahima Mbaye Ndiaye
Mamadou Alpha Diallo
Khadim Diongue
Sarah K. Volkman
Aida Sadikh Badiane
Daouda Ndiaye
机构
[1] Université Cheikh Anta Diop de Dakar (UCAD),Laboratoire de Parasitologie
[2] Hôpital Aristide Le Dantec,Mycologie
[3] Broad Institute of MIT and Harvard,Department of Immunology and Infectious Diseases
[4] Yale School of Public Health,undefined
[5] Harvard University,undefined
来源
关键词
Molecular epidemiology; Multiplexed amplicon deep sequencing; MOI;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Molecular epidemiology of Plasmodium falciparum by multiplexed amplicon deep sequencing in Senegal
    Ndiaye, Tolla
    Sy, Mouhamad
    Gaye, Amy
    Siddle, Katherine J.
    Park, Daniel J.
    Bei, Amy K.
    Deme, Awa B.
    Mbaye, Aminata
    Dieye, Baba
    Ndiaye, Yaye Die
    Ndiaye, Ibrahima Mbaye
    Diallo, Mamadou Alpha
    Diongue, Khadim
    Volkman, Sarah K.
    Badiane, Aida Sadikh
    Ndiaye, Daouda
    [J]. MALARIA JOURNAL, 2020, 19 (01)
  • [2] Molecular Epidemiology of Plasmodium falciparum kelch13 Mutations in Senegal Determined by Using Targeted Amplicon Deep Sequencing
    Talundzic, Eldin
    Ndiaye, Yaye D.
    Deme, Awa B.
    Olsen, Christian
    Patel, Dhruviben S.
    Biliya, Shweta
    Daniels, Rachel
    Vannberg, Fredrik O.
    Volkman, Sarah K.
    Udhayakumar, Venkatachalam
    Ndiaye, Daouda
    [J]. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2017, 61 (03)
  • [3] Amplicon deep sequencing of kelch13 in Plasmodium falciparum isolates from Senegal
    Amy Gaye
    Mouhamad Sy
    Tolla Ndiaye
    Katherine J. Siddle
    Daniel J. Park
    Awa B. Deme
    Aminata Mbaye
    Baba Dieye
    Yaye Die Ndiaye
    Daniel E. Neafsey
    Angela Early
    Timothy Farrell
    Mamadou Samb Yade
    Mamadou Alpha Diallo
    Khadim Diongue
    Amy Bei
    Ibrahima Mbaye Ndiaye
    Sarah K. Volkman
    Aida Sadikh Badiane
    Daouda Ndiaye
    [J]. Malaria Journal, 19
  • [4] Amplicon deep sequencing of kelch13 in Plasmodium falciparum isolates from Senegal
    Gaye, Amy
    Sy, Mouhamad
    Ndiaye, Tolla
    Siddle, Katherine J.
    Park, Daniel J.
    Deme, Awa B.
    Mbaye, Aminata
    Dieye, Baba
    Ndiaye, Yaye Die
    Neafsey, Daniel E.
    Early, Angela
    Farrell, Timothy
    Yade, Mamadou Samb
    Diallo, Mamadou Alpha
    Diongue, Khadim
    Bei, Amy
    Ndiaye, Ibrahima Mbaye
    Volkman, Sarah K.
    Badiane, Aida Sadikh
    Ndiaye, Daouda
    [J]. MALARIA JOURNAL, 2020, 19 (01)
  • [5] UNDERSTANDING RESIDUAL PLASMODIUM FALCIPARUM TRANSMISSION IN ZANZIBAR THROUGH MULTIPLEXED AMPLICON DEEP SEQUENCING
    Holzschuh, Aurel
    Lerch, Anita
    Fakih, Bakar S.
    Stuck, Logan
    Al-Mafazy, Abdul-Wahid H.
    Ali, Abdullah
    Hetzel, Manuel W.
    Yukich, Joshua
    Koepfli, Cristian
    [J]. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2021, 105 (05): : 78 - 78
  • [6] DEVELOPMENT AND EVALUATION OF NEW MULTIPLEXED AMPLICON SEQUENCING ASSAYS FOR PLASMODIUM FALCIPARUM MOLECULAR SURVEILLANCE
    LaVerriere, Emily
    Schwabl, Philipp
    Carrasquilla, Manuela
    Taylor, Aimee
    Early, Angela
    Panchal, Ruchit
    Straub, Timothy
    Shieh, Meg
    Johnson, Zachary
    MacInnis, Bronwyn
    Neafsey, Daniel
    [J]. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2021, 105 (05): : 214 - 214
  • [7] MULTIPLEXED AMPLICON SEQUENCING OF PLASMODIUM FALCIPARUM FOR DRUG RESISTANCE GENOTYPING AND BARCODING
    Jacob, Christopher
    Park, Naomi
    Drury, Eleanor
    Rockett, Kirk
    Goodwin, Scott
    Scott, Carol
    Simpson, Victoria
    Goncalves, Sonia
    Miotto, Olivo
    Kwiatkowski, Dominic
    [J]. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2019, 101 : 298 - 298
  • [8] Genotyping Plasmodium falciparum gametocytes using amplicon deep sequencing
    Jimmy Vareta
    Natalie A. Horstman
    Matthew Adams
    Karl B. Seydel
    Robert S. McCann
    Lauren M. Cohee
    Miriam K. Laufer
    Shannon Takala-Harrison
    [J]. Malaria Journal, 23
  • [9] Genotyping Plasmodium falciparum gametocytes using amplicon deep sequencing
    Vareta, Jimmy
    Horstman, Natalie A.
    Adams, Matthew
    Seydel, Karl B.
    Mccann, Robert S.
    Cohee, Lauren M.
    Laufer, Miriam K.
    Takala-Harrison, Shannon
    [J]. MALARIA JOURNAL, 2024, 23 (01)
  • [10] GENOTYPING PLASMODIUM FALCIPARUM MATURE GAMETOCYTES USING AMPLICON DEEP SEQUENCING
    Vareta, Jimmy
    Shrestha, Biraj
    Ouattara, Amed
    Laufer, Miriam
    Takala-Harrison, Shannon
    [J]. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2021, 105 (05): : 361 - 362