Giant tortoise genomes provide insights into longevity and age-related disease

被引:0
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作者
Víctor Quesada
Sandra Freitas-Rodríguez
Joshua Miller
José G. Pérez-Silva
Zi-Feng Jiang
Washington Tapia
Olaya Santiago-Fernández
Diana Campos-Iglesias
Lukas F. K. Kuderna
Maud Quinzin
Miguel G. Álvarez
Dido Carrero
Luciano B. Beheregaray
James P. Gibbs
Ylenia Chiari
Scott Glaberman
Claudio Ciofi
Miguel Araujo-Voces
Pablo Mayoral
Javier R. Arango
Isaac Tamargo-Gómez
David Roiz-Valle
María Pascual-Torner
Benjamin R. Evans
Danielle L. Edwards
Ryan C. Garrick
Michael A. Russello
Nikos Poulakakis
Stephen J. Gaughran
Danny O. Rueda
Gabriel Bretones
Tomàs Marquès-Bonet
Kevin P. White
Adalgisa Caccone
Carlos López-Otín
机构
[1] Universidad de Oviedo,Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC
[2] Yale University,Department of Ecology and Evolutionary Biology
[3] The University of Chicago,Institute for Genomics and Systems Biology
[4] Galapagos National Park Directorate,CNAG
[5] Galapagos Conservancy,CRG, Centre for Genomic Regulation
[6] Institute of Evolutionary Biology (UPF-CSIC),College of Science and Engineering
[7] Barcelona Institute of Science and Technology ,College of Environmental Science and Forestry
[8] Flinders University,Department of Biology
[9] State University of New York,Department of Biology
[10] University of South Alabama,School of Natural Sciences
[11] University of Florence,Department of Biology
[12] University of California,Department of Biology
[13] University of Mississippi,Department of Biology, School of Sciences and Engineering
[14] The University of British Columbia,Institut Català de Paleontologia Miquel Crusafont
[15] University of Crete,undefined
[16] Natural History Museum of Crete,undefined
[17] Catalan Institution of Research and Advanced Studies,undefined
[18] Universitat Autònoma de Barcelona,undefined
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摘要
Giant tortoises are among the longest-lived vertebrate animals and, as such, provide an excellent model to study traits like longevity and age-related diseases. However, genomic and molecular evolutionary information on giant tortoises is scarce. Here, we describe a global analysis of the genomes of Lonesome George—the iconic last member of Chelonoidis abingdonii—and the Aldabra giant tortoise (Aldabrachelys gigantea). Comparison of these genomes with those of related species, using both unsupervised and supervised analyses, led us to detect lineage-specific variants affecting DNA repair genes, inflammatory mediators and genes related to cancer development. Our study also hints at specific evolutionary strategies linked to increased lifespan, and expands our understanding of the genomic determinants of ageing. These new genome sequences also provide important resources to help the efforts for restoration of giant tortoise populations.
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页码:87 / 95
页数:8
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