A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data

被引：0
|
作者：
Yuanyuan Li
Kai Kang
Juno M. Krahn
Nicole Croutwater
Kevin Lee
David M. Umbach
Leping Li
机构：
[1] National Institute of Environmental Health Sciences,Biostatistics and Computational Biology Branch
[2] NIH,Genome Integrity & Structural Biology Laboratory
[3] National Institute of Environmental Health Sciences,undefined
[4] NIH,undefined
来源：
BMC Genomics | / 18卷
关键词：
Pan-cancer; Classification; Ga/KNN; RNA-seq; TCGA; And sex dimorphism;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data
    Li, Yuanyuan
    Kang, Kai
    Krahn, Juno M.
    Croutwater, Nicole
    Lee, Kevin
    Umbach, David M.
    Li, Leping
    [J]. BMC GENOMICS, 2017, 18
  • [2] Pan-cancer classification on gene expression data by neural network
    Yu, Kijin
    Kim, Bong-Hyun
    Lee, Peter Chang Whan
    [J]. CANCER RESEARCH, 2019, 79 (13)
  • [3] The Cancer Genome Atlas Pan-Cancer analysis project
    Weinstein, John N.
    Collisson, Eric A.
    Mills, Gordon B.
    Shaw, Kenna R. Mills
    Ozenberger, Brad A.
    Ellrott, Kyle
    Shmulevich, Ilya
    Sander, Chris
    Stuart, Joshua M.
    [J]. NATURE GENETICS, 2013, 45 (10) : 1113 - 1120
  • [4] A pan-cancer proteomic perspective on The Cancer Genome Atlas
    Rehan Akbani
    Patrick Kwok Shing Ng
    Henrica M. J. Werner
    Maria Shahmoradgoli
    Fan Zhang
    Zhenlin Ju
    Wenbin Liu
    Ji-Yeon Yang
    Kosuke Yoshihara
    Jun Li
    Shiyun Ling
    Elena G. Seviour
    Prahlad T. Ram
    John D. Minna
    Lixia Diao
    Pan Tong
    John V. Heymach
    Steven M. Hill
    Frank Dondelinger
    Nicolas Städler
    Lauren A. Byers
    Funda Meric-Bernstam
    John N. Weinstein
    Bradley M. Broom
    Roeland G. W. Verhaak
    Han Liang
    Sach Mukherjee
    Yiling Lu
    Gordon B. Mills
    [J]. Nature Communications, 5
  • [5] The Cancer Genome Atlas Pan-Cancer analysis project
    John N Weinstein
    Eric A Collisson
    Gordon B Mills
    Kenna R Mills Shaw
    Brad A Ozenberger
    Kyle Ellrott
    Ilya Shmulevich
    Chris Sander
    Joshua M Stuart
    [J]. Nature Genetics, 2013, 45 : 1113 - 1120
  • [6] A pan-cancer proteomic perspective on The Cancer Genome Atlas
    Akbani, Rehan
    Ng, Patrick Kwok Shing
    Werner, Henrica M. J.
    Shahmoradgoli, Maria
    Zhang, Fan
    Ju, Zhenlin
    Liu, Wenbin
    Yang, Ji-Yeon
    Yoshihara, Kosuke
    Li, Jun
    Ling, Shiyun
    Seviour, Elena G.
    Ram, Prahlad T.
    Minna, John D.
    Diao, Lixia
    Tong, Pan
    Heymach, John V.
    Hill, Steven M.
    Dondelinger, Frank
    Stadler, Nicolas
    Byers, Lauren A.
    Meric-Bernstam, Funda
    Weinstein, John N.
    Broom, Bradley M.
    Verhaak, Roeland G. W.
    Liang, Han
    Mukherjee, Sach
    Lu, Yiling
    Mills, Gordon B.
    [J]. NATURE COMMUNICATIONS, 2014, 5
  • [7] Analysis of Gene Expression Cancer Data Set: Classification of TCGA Pan-cancer HiSeq Data
    Nitta, Yusaku
    Borders, Mitchell
    Ludwig, Simone A.
    [J]. 2021 IEEE INTERNATIONAL CONFERENCE ON BIG DATA (BIG DATA), 2021, : 4745 - 4752
  • [8] Pan-cancer analysis of transcriptional metabolic dysregulation using The Cancer Genome Atlas
    S. R. Rosario
    M. D. Long
    H. C. Affronti
    A. M. Rowsam
    K. H. Eng
    D. J. Smiraglia
    [J]. Nature Communications, 9
  • [9] Pan-cancer analysis of transcriptional metabolic dysregulation using The Cancer Genome Atlas
    Rosario, S. R.
    Long, M. D.
    Affronti, H. C.
    Rowsam, A. M.
    Eng, K. H.
    Smiraglia, D. J.
    [J]. NATURE COMMUNICATIONS, 2018, 9
  • [10] A pan-cancer atlas
    Tal Nawy
    [J]. Nature Methods, 2018, 15 : 407 - 407
12345