Design and implementation of microarray gene expression markup language (MAGE-ML)

被引:0
|
作者
Paul T Spellman
Michael Miller
Jason Stewart
Charles Troup
Ugis Sarkans
Steve Chervitz
Derek Bernhart
Gavin Sherlock
Catherine Ball
Marc Lepage
Marcin Swiatek
WL Marks
Jason Goncalves
Scott Markel
Daniel Iordan
Mohammadreza Shojatalab
Angel Pizarro
Joe White
Robert Hubley
Eric Deutsch
Martin Senger
Bruce J Aronow
Alan Robinson
Doug Bassett
Christian J Stoeckert
Alvis Brazma
机构
[1] University of California at Berkeley,Department of Cell and Molecular Biology
[2] Rosetta Biosoftware,European Bioinformatics Institute
[3] Open Informatics,Department of Genetics
[4] Bioscience Research - Agilent Technologies,Molecular Mining Corporation
[5] EMBL Hinxton Outstation,LION bioscience Inc.
[6] Affymetrix,Center for Bioinformatics
[7] Inc.,The Institute for Genomic Research
[8] Stanford University School of Medicine,Computational Biology
[9] Rideau St,CHRF, Burnet Ave
[10] Imaging Research Inc.,undefined
[11] ,undefined
[12] Iobion Informatics LLC,undefined
[13] Executive Drive,undefined
[14] University of Pennsylvania,undefined
[15] Guardian Drive,undefined
[16] Medical Center Drive,undefined
[17] Institute for Systems Biology,undefined
[18] University of Cincinnati College of Medicine,undefined
来源
Genome Biology | / 3卷 / 9期
关键词
Unify Modeling Language; Microarray Experiment; Application Programmer Interface; Microarray Gene Expression; Database Schema;
D O I
10.1186/gb-2002-3-9-research0046
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 37 条
  • [1] Design and implementation of microarray gene expression markup language (MAGE-ML)
    Spellman, Paul T.
    Miller, Michael
    Stewart, Jason
    Troup, Charles
    Sarkans, Ugis
    Chervitz, Steve
    Bernhart, Derek
    Sherlock, Gavin
    Ball, Catherine
    Lepage, Marc
    Swiatek, Marcin
    Marks, W. L.
    Goncalves, Jason
    Markel, Scott
    Iordan, Daniel
    Shojatalab, Mohammadreza
    Pizarro, Angel
    White, Joe
    Hubley, Robert
    Deutsch, Eric
    Senger, Martin
    Aronow, Bruce J.
    Robinson, Alan
    Bassett, Doug
    Stoeckert, Christian J., Jr.
    Brazma, Alvis
    [J]. GENOME BIOLOGY, 2002, 3 (09):
  • [2] Importing MAGE-ML format microarray data into BioConductor
    Durinck, S
    Allemeersch, J
    Carey, VJ
    Moreau, Y
    De Moor, B
    [J]. BIOINFORMATICS, 2004, 20 (18) : 3641 - 3642
  • [3] MageBuilder: A schema translation tool for generating MAGE-ML from tabular microarray data
    Martin, W
    Horton, RM
    [J]. PROCEEDINGS OF THE 2003 IEEE BIOINFORMATICS CONFERENCE, 2003, : 431 - 432
  • [4] Design and implementation of an ECA rule markup language
    Seiriö, M
    Berndtsson, M
    [J]. RULES AND RULE MARKUP LANGUAGES FOR THE SEMANTIC WEB, PROCEEDINGS, 2005, 3791 : 98 - 112
  • [5] Design and Implementation of Predictive Model Markup Language Interpretation Engine
    Zhang, Yinye
    Jiao, Yaqin
    [J]. 2015 INTERNATIONAL CONFERENCE ON NETWORK AND INFORMATION SYSTEMS FOR COMPUTERS (ICNISC), 2015, : 527 - 531
  • [6] A software framework for microarray and gene expression object model (MAGE-OM) array design annotation
    Matloob Qureshi
    Alasdair Ivens
    [J]. BMC Genomics, 9
  • [7] A software framework for microarray and gene expression object model (MAGE-OM) array design annotation
    Qureshi, Matloob
    Ivens, Alasdair
    [J]. BMC GENOMICS, 2008, 9 (1)
  • [8] Design and implementation of markup language for integrating of motion capture data formats
    Chung, HS
    Lee, Y
    [J]. IEICE TRANSACTIONS ON INFORMATION AND SYSTEMS, 2004, E87D (07): : 1897 - 1909
  • [9] Design and Implementation of Standard Compliance Testing for Chinese News Markup Language
    Wang, Yanfeng
    Zhang, Pengzhou
    [J]. Proceedings - 2021 8th International Conference on Computational Science/Intelligence and Applied Informatics, CSII 2021, 2021, : 38 - 42
  • [10] Deconstructing language by comparative gene expression: from neurobiology to microarray
    Oldham, MC
    Geschwind, DH
    [J]. GENES BRAIN AND BEHAVIOR, 2006, 5 : 54 - 63