An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions

被引:0
|
作者
Annabelle Haudry
Adrian E Platts
Emilio Vello
Douglas R Hoen
Mickael Leclercq
Robert J Williamson
Ewa Forczek
Zoé Joly-Lopez
Joshua G Steffen
Khaled M Hazzouri
Ken Dewar
John R Stinchcombe
Daniel J Schoen
Xiaowu Wang
Jeremy Schmutz
Christopher D Town
Patrick P Edger
J Chris Pires
Karen S Schumaker
David E Jarvis
Terezie Mandáková
Martin A Lysak
Erik van den Bergh
M Eric Schranz
Paul M Harrison
Alan M Moses
Thomas E Bureau
Stephen I Wright
Mathieu Blanchette
机构
[1] University of Toronto,Department of Ecology and Evolutionary Biology
[2] Université Lyon 1,Department of Biology
[3] Centre National de la Recherche Scientifique (CNRS),Nature Sciences Department
[4] Unité Mixte de Recherche (UMR) 5558,Department of Human Genetics
[5] Laboratoire de Biométrie et Biologie Evolutive,Division of Biological Sciences
[6] School of Computer Science,undefined
[7] McGill University,undefined
[8] Montreal,undefined
[9] McGill Centre for Bioinformatics,undefined
[10] McGill University,undefined
[11] McGill University,undefined
[12] Colby-Sawyer College,undefined
[13] McGill University,undefined
[14] Institute of Vegetables and Flowers (IVF),undefined
[15] Chinese Academy of Agricultural Sciences (CAAS),undefined
[16] US Department of Energy Joint Genome Institute,undefined
[17] HudsonAlpha Institute of Biotechnology,undefined
[18] J. Craig Venter Institute,undefined
[19] University of Missouri,undefined
[20] The School of Plant Sciences,undefined
[21] University of Arizona,undefined
[22] Plant Cytogenomics,undefined
[23] Central European Institute of Technology (CEITEC),undefined
[24] Masaryk University,undefined
[25] Biosystematics Group,undefined
[26] Plant Sciences,undefined
[27] Wageningen University,undefined
[28] Centre for the Analysis of Genome Evolution and Function,undefined
[29] University of Toronto,undefined
来源
Nature Genetics | 2013年 / 45卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Mathieu Blanchette and colleagues report whole-genome sequencing of three Brassicaceae species, Leavenworthia alabamica, Sisymbrium irio and Aethionema arabicum. They include comparative genomic analysis with 6 additional crucifier genomes, identify and characterize over 90,000 conserved noncoding sequences and provide a map of functional noncoding regions in plant genomes.
引用
收藏
页码:891 / 898
页数:7
相关论文
共 2 条
  • [1] An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
    Haudry, Annabelle
    Platts, Adrian E.
    Vello, Emilio
    Hoen, Douglas R.
    Leclercq, Mickael
    Williamson, Robert J.
    Forczek, Ewa
    Joly-Lopez, Zoe
    Steffen, Joshua G.
    Hazzouri, Khaled M.
    Dewar, Ken
    Stinchcombe, John R.
    Schoen, Daniel J.
    Wang, Xiaowu
    Schmutz, Jeremy
    Town, Christopher D.
    Edger, Patrick P.
    Pires, J. Chris
    Schumaker, Karen S.
    Jarvis, David E.
    Mandakova, Terezie
    Lysak, Martin A.
    van den Bergh, Erik
    Schranz, M. Eric
    Harrison, Paul M.
    Moses, Alan M.
    Bureau, Thomas E.
    Wright, Stephen I.
    Blanchette, Mathieu
    NATURE GENETICS, 2013, 45 (08) : 891 - U228
  • [2] Phylogenetic analysis of 5′-noncoding regions from the ABA-responsive rab 16/17 gene family of sorghum, maize and rice provides insight into the composition, organization and function of cis-regulatory modules
    Buchanan, CD
    Klein, PE
    Mullet, JE
    GENETICS, 2004, 168 (03) : 1639 - 1654