Machine learning approach for quantitative biodosimetry of partial-body or total-body radiation exposures by combining radiation-responsive biomarkers

被引:0
|
作者
Igor Shuryak
Leah Nemzow
Bezalel A. Bacon
Maria Taveras
Xuefeng Wu
Naresh Deoli
Brian Ponnaiya
Guy Garty
David J. Brenner
Helen C. Turner
机构
[1] Columbia University Irving Medical Center,Center for Radiological Research
[2] Columbia University Irving Medical Center,Radiological Research Accelerator Facility
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
During a large-scale radiological event such as an improvised nuclear device detonation, many survivors will be shielded from radiation by environmental objects, and experience only partial-body irradiation (PBI), which has different consequences, compared with total-body irradiation (TBI). In this study, we tested the hypothesis that applying machine learning to a combination of radiation-responsive biomarkers (ACTN1, DDB2, FDXR) and B and T cell counts will quantify and distinguish between PBI and TBI exposures. Adult C57BL/6 mice of both sexes were exposed to 0, 2.0–2.5 or 5.0 Gy of half-body PBI or TBI. The random forest (RF) algorithm trained on ½ of the data reconstructed the radiation dose on the remaining testing portion of the data with mean absolute error of 0.749 Gy and reconstructed the product of dose and exposure status (defined as 1.0 × Dose for TBI and 0.5 × Dose for PBI) with MAE of 0.472 Gy. Among irradiated samples, PBI could be distinguished from TBI: ROC curve AUC = 0.944 (95% CI: 0.844–1.0). Mouse sex did not significantly affect dose reconstruction. These results support the hypothesis that combinations of protein biomarkers and blood cell counts can complement existing methods for biodosimetry of PBI and TBI exposures.
引用
收藏
相关论文
共 34 条
  • [1] Machine learning approach for quantitative biodosimetry of partial-body or total-body radiation exposures by combining radiation-responsive biomarkers
    Shuryak, Igor
    Nemzow, Leah
    Bacon, Bezalel A.
    Taveras, Maria
    Wu, Xuefeng
    Deoli, Naresh
    Ponnaiya, Brian
    Garty, Guy
    Brenner, David J.
    Turner, Helen C.
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [2] Prediction of Total-Body and Partial-Body Exposures to Radiation Using Plasma Proteomic Expression Profiles
    Sproull, M.
    Kawai, T.
    Krauze, A.
    Shankavaram, U.
    Camphausen, K.
    RADIATION RESEARCH, 2022, 198 (06) : 573 - 581
  • [3] Multivariate Analysis of Radiation Responsive Proteins to Predict Radiation Exposure in Total-Body Irradiation and Partial-Body Irradiation Models
    Sproull, Mary
    Kramp, Tamalee
    Tandle, Anita
    Shankavaram, Uma
    Camphausen, Kevin
    RADIATION RESEARCH, 2017, 187 (02) : 251 - 258
  • [4] USEFUL RADIATION DOSE BIOMARKERS FOR EARLY IDENTIFICATION OF PARTIAL-BODY EXPOSURES
    Herodin, Francis
    Valente, Marco
    Abend, Michael
    HEALTH PHYSICS, 2014, 106 (06): : 750 - 754
  • [5] Estimating partial-body ionizing radiation exposure by automated cytogenetic biodosimetry
    Shirley, Ben C.
    Knoll, Joan H. M.
    Moquet, Jayne
    Ainsbury, Elizabeth
    Ngoc-Duy Pham
    Norton, Farrah
    Wilkins, Ruth C.
    Rogan, Peter K.
    INTERNATIONAL JOURNAL OF RADIATION BIOLOGY, 2020, 96 (11) : 1492 - 1503
  • [6] Revisiting Biomarkers of Total-Body and Partial-Body Exposure in a Baboon Model of Irradiation
    Valente, Marco
    Denis, Josiane
    Grenier, Nancy
    Arvers, Philippe
    Foucher, Barbara
    Desangles, Francois
    Martigne, Patrick
    Chaussard, Herve
    Drouet, Michel
    Abend, Michael
    Herodin, Francis
    PLOS ONE, 2015, 10 (07):
  • [7] Murine partial-body radiation exposure model for biodosimetry studies - Preliminary report
    Blakely, William F.
    Sandgren, David J.
    Nagy, Vitaly
    Kim, Sung-Yop
    Ossetrova, Natalia I.
    RADIATION MEASUREMENTS, 2011, 46 (09) : 898 - 902
  • [8] A High Throughput Approach to Reconstruct Partial-Body and Neutron Radiation Exposures on an Individual Basis
    Igor Shuryak
    Helen C. Turner
    Jay R. Perrier
    Lydia Cunha
    Monica Pujol Canadell
    Mohammad H. Durrani
    Andrew Harken
    Antonella Bertucci
    Maria Taveras
    Guy Garty
    David J. Brenner
    Scientific Reports, 10
  • [9] A High Throughput Approach to Reconstruct Partial-Body and Neutron Radiation Exposures on an Individual Basis
    Shuryak, Igor
    Turner, Helen C.
    Perrier, Jay R.
    Cunha, Lydia
    Canadell, Monica Pujol
    Durrani, Mohammad H.
    Harken, Andrew
    Bertucci, Antonella
    Taveras, Maria
    Garty, Guy
    Brenner, David J.
    SCIENTIFIC REPORTS, 2020, 10 (01)
  • [10] Biomarkers for Radiation Biodosimetry and Injury Assessment after Mixed-field (Neutron and Gamma) Radiation in the Mouse Total-body Irradiation Model
    Ossetrova, Natalia I.
    Stanton, Paul
    Krasnopolsky, Katya
    Ismail, Mohammed
    Doreswamy, Arpitha
    Hieber, Kevin P.
    HEALTH PHYSICS, 2018, 115 (06): : 727 - 742