Fungal communities in sediments of subtropical Chinese seas as estimated by DNA metabarcoding

被引:0
|
作者
Wei Li
Meng Meng Wang
Xi Guang Wang
Xiao Li Cheng
Jia Jia Guo
Xiao Meng Bian
Lei Cai
机构
[1] College of Marine Life Sciences,
[2] Ocean University of China,undefined
[3] Institute of Agricultural Information,undefined
[4] Chinese Academy of Agricultural Sciences,undefined
[5] State Key Laboratory of Mycology,undefined
[6] Institute of Microbiology,undefined
[7] Chinese Academy of Sciences,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Ribosomal RNA internal transcribed spacer-1 (ITS1) metabarcoding was used to investigate the distribution patterns of fungal communities and the factors influencing these patterns in subtropical Chinese seas, including the southern and northern Yellow Sea and the Bohai Sea. These seas were found to harbor high levels of fungal diversity, with 816 operational taxonomic units (OTUs) that span 130 known genera, 36 orders, 14 classes and 5 phyla. Ascomycota was the most abundant phylum, containing 72.18% and 79.61% of all OTUs and sequences, respectively, followed by Basidiomycota (19.98%, 18.64%), Zygomycota (1.10%, 0.11%), Chytridiomycota (0.25%, 0.04%) and Rozellomycota (0.12%, 0.006%). The compositions of fungal communities across these three sea regions were found to be vary, which may be attributed to sediment source, geographical distance, latitude and some environmental factors such as the temperature and salinity of bottom water, water depth, total nitrogen, and the ratio of total organic carbon to nitrogen. Among these environmental factors, the temperature of bottom water is the most important driver that governs the distribution patterns of fungal communities across the sampled seas. Our data also suggest that the cold-water mass of the Yellow Sea likely balances competitive relationships between fungal taxa rather than increasing species richness levels.
引用
收藏
相关论文
共 50 条
  • [1] Fungal communities in sediments of subtropical Chinese seas as estimated by DNA metabarcoding
    Li, Wei
    Wang, Meng Meng
    Wang, Xi Guang
    Cheng, Xiao Li
    Guo, Jia Jia
    Bian, Xiao Meng
    Cai, Lei
    SCIENTIFIC REPORTS, 2016, 6
  • [2] Diversity, distribution and ecology of fungal communities present in Antarctic lake sediments uncovered by DNA metabarcoding
    Drumond de Souza, Lauren Machado
    Lirio, Juan Manuel
    Coria, Silvia Herminda
    Cardoso Lopes, Fabyano Alvares
    Convey, Peter
    Carvalho-Silva, Micheline
    de Oliveira, Fabio Soares
    Rosa, Carlos Augusto
    Aguiar Saraiva Camara, Paulo Eduardo
    Rosa, Luiz Henrique
    SCIENTIFIC REPORTS, 2022, 12 (01)
  • [3] Diversity, distribution and ecology of fungal communities present in Antarctic lake sediments uncovered by DNA metabarcoding
    Láuren Machado Drumond de Souza
    Juan Manuel Lirio
    Silvia Herminda Coria
    Fabyano Alvares Cardoso Lopes
    Peter Convey
    Micheline Carvalho-Silva
    Fábio Soares de Oliveira
    Carlos Augusto Rosa
    Paulo Eduardo Aguiar Saraiva Câmara
    Luiz Henrique Rosa
    Scientific Reports, 12
  • [4] DNA metabarcoding uncovers fungal communities in Zingiberis Rhizoma
    Chune Fan
    Yanan Xu
    Yufeng Li
    Meihua Yang
    Jianping Han
    Xiaohui Pang
    Chinese Herbal Medicines, 2024, 16 (04) : 679 - 685
  • [5] Bacterial and Archaeal Communities in Sediments of the North Chinese Marginal Seas
    Jiwen Liu
    Xiaoshou Liu
    Min Wang
    Yanlu Qiao
    Yanfen Zheng
    Xiao-Hua Zhang
    Microbial Ecology, 2015, 70 : 105 - 117
  • [6] Bacterial and Archaeal Communities in Sediments of the North Chinese Marginal Seas
    Liu, Jiwen
    Liu, Xiaoshou
    Wang, Min
    Qiao, Yanlu
    Zheng, Yanfen
    Zhang, Xiao-Hua
    MICROBIAL ECOLOGY, 2015, 70 (01) : 105 - 117
  • [7] DNA metabarcoding of fungal communities in Heshouwu (Polygonum multiflorum Thunb.)
    Guo, Mengyue
    Yu, Jingsheng
    Dao, Yujie
    Jiang, Wenjun
    Pang, Xiaohui
    FOOD CONTROL, 2022, 136
  • [8] Effect of Hydrocarbon Pollution on the Fungal Communities of the Littoral Sediments of the White and Barents Seas
    Fadeev, A. Yu.
    Gavirova, L. A.
    Georgieva, M. L.
    Kozlovsky, V. V.
    Simakova, U. V.
    Shestakov, A. I.
    Bubnova, E. N.
    MICROBIOLOGY, 2024, 93 (01) : 51 - 60
  • [9] Effect of Hydrocarbon Pollution on the Fungal Communities of the Littoral Sediments of the White and Barents Seas
    A. Yu. Fadeev
    L. A. Gavirova
    M. L. Georgieva
    V. V. Kozlovsky
    U. V. Simakova
    A. I. Shestakov
    E. N. Bubnova
    Microbiology, 2024, 93 : 51 - 60
  • [10] Metatranscriptomics and metabarcoding reveal spatiotemporal shifts in fungal communities and their activities in Chinese coastal waters
    Wang, Mengmeng
    Mara, Paraskevi
    Burgaud, Gaetan
    Edgcomb, Virginia
    Long, Xuedan
    Yang, Haiping
    Cai, Lei
    Li, Wei
    MOLECULAR ECOLOGY, 2023, 32 (11) : 2750 - 2765