A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity

被引：0
|
作者：
Jianjian Qi
Xin Liu
Di Shen
Han Miao
Bingyan Xie
Xixiang Li
Peng Zeng
Shenhao Wang
Yi Shang
Xingfang Gu
Yongchen Du
Ying Li
Tao Lin
Jinhong Yuan
Xueyong Yang
Jinfeng Chen
Huiming Chen
Xingyao Xiong
Ke Huang
Zhangjun Fei
Linyong Mao
Li Tian
Thomas Städler
Susanne S Renner
Sophien Kamoun
William J Lucas
Zhonghua Zhang
Sanwen Huang
机构：
[1] Institute of Vegetables and Flowers of the Chinese Academy of Agricultural Sciences,US Department of Agriculture (USDA) Robert W. Holley Center for Agriculture and Health
[2] Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of the Ministry of Agriculture,Department of Plant Sciences
[3] Sino-Dutch Joint Laboratory of Horticultural Genomics,Department of Biology
[4] BGI-Shenzhen,Department of Plant Biology
[5] State Key Laboratory of Crop Genetics and Germplasm Enhancement,undefined
[6] College of Horticulture,undefined
[7] Nanjing Agricultural University,undefined
[8] Hunan Vegetable Research Institute,undefined
[9] Hunan Academy of Agricultural Sciences,undefined
[10] Hunan Provincial Key Laboratory for Germplasm Innovation and Utilization of Crop,undefined
[11] Horticulture & Landscape College,undefined
[12] Hunan Agricultural University,undefined
[13] Boyce Thompson Institute for Plant Research,undefined
[14] University of California,undefined
[15] Davis,undefined
[16] Plant Ecological Genetics,undefined
[17] Institute of Integrative Biology,undefined
[18] Eidgenössische Technische Hochschule (ETH) Zurich,undefined
[19] University of Munich,undefined
[20] The Sainsbury Laboratory,undefined
[21] Norwich Research Park,undefined
[22] University of California,undefined
[23] Davis,undefined
来源：
Nature Genetics | 2013年 / 45卷
关键词：
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Sanwen Huang and colleagues report a genomic variation map of cucumber. They report the resequencing of 115 cucumber accessions and de novo assembly of the wild cucumber genome.
引用
收藏
页码：1510 / 1515
页数：5
相关论文
共 50 条
  • [1] A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity
    Qi, Jianjian
    Liu, Xin
    Shen, Di
    Miao, Han
    Xie, Bingyan
    Li, Xixiang
    Zeng, Peng
    Wang, Shenhao
    Shang, Yi
    Gu, Xingfang
    Du, Yongchen
    Li, Ying
    Lin, Tao
    Yuan, Jinhong
    Yang, Xueyong
    Chen, Jinfeng
    Chen, Huiming
    Xiong, Xingyao
    Huang, Ke
    Fei, Zhangjun
    Mao, Linyong
    Tian, Li
    Staedler, Thomas
    Renner, Susanne S.
    Kamoun, Sophien
    Lucas, William J.
    Zhang, Zhonghua
    Huang, Sanwen
    NATURE GENETICS, 2013, 45 (12) : 1510 - U149
  • [2] A Genomic Variation Map Provides Insights into the Genetic Basis of Spring Chinese Cabbage (Brassica rapa ssp pekinensis) Selection
    Su, Tongbing
    Wang, Weihong
    Li, Peirong
    Zhang, Bin
    Li, Pan
    Xin, Xiaoyun
    Sun, Honghe
    Yu, Yangjun
    Zhang, Deshuang
    Zhao, Xiuyun
    Wen, Changlong
    Zhou, Gang
    Wang, Yuntong
    Zheng, Hongkun
    Yu, Shuancang
    Zhang, Fenglan
    MOLECULAR PLANT, 2018, 11 (11) : 1360 - 1376
  • [3] A genomic variation map provides insights into peanut diversity in China and associations with 28 agronomic traits
    Lu, Qing
    Huang, Lu
    Liu, Hao
    Garg, Vanika
    Gangurde, Sunil S.
    Li, Haifen
    Chitikineni, Annapurna
    Guo, Dandan
    Pandey, Manish K.
    Li, Shaoxiong
    Liu, Haiyan
    Wang, Runfeng
    Deng, Quanqing
    Du, Puxuan
    Varshney, Rajeev K.
    Liang, Xuanqiang
    Hong, Yanbin
    Chen, Xiaoping
    NATURE GENETICS, 2024, 56 (03) : 530 - 540
  • [4] A genomic variation map provides insights into peanut diversity in China and associations with 28 agronomic traits
    Qing Lu
    Lu Huang
    Hao Liu
    Vanika Garg
    Sunil S. Gangurde
    Haifen Li
    Annapurna Chitikineni
    Dandan Guo
    Manish K. Pandey
    Shaoxiong Li
    Haiyan Liu
    Runfeng Wang
    Quanqing Deng
    Puxuan Du
    Rajeev K. Varshney
    Xuanqiang Liang
    Yanbin Hong
    Xiaoping Chen
    Nature Genetics, 2024, 56 : 530 - 540
  • [5] Genomic insights into the origin, domestication and genetic basis of agronomic traits of castor bean
    Wei Xu
    Di Wu
    Tianquan Yang
    Chao Sun
    Zaiqing Wang
    Bing Han
    Shibo Wu
    Anmin Yu
    Mark A. Chapman
    Sammy Muraguri
    Qing Tan
    Wenbo Wang
    Zhigui Bao
    Aizhong Liu
    De-Zhu Li
    Genome Biology, 22
  • [6] Genomic analyses provide insights into spinach domestication and the genetic basis of agronomic traits
    Xiaofeng Cai
    Xuepeng Sun
    Chenxi Xu
    Honghe Sun
    Xiaoli Wang
    Chenhui Ge
    Zhonghua Zhang
    Quanxi Wang
    Zhangjun Fei
    Chen Jiao
    Quanhua Wang
    Nature Communications, 12
  • [7] Genomic insights into the origin, domestication and genetic basis of agronomic traits of castor bean
    Xu, Wei
    Wu, Di
    Yang, Tianquan
    Sun, Chao
    Wang, Zaiqing
    Han, Bing
    Wu, Shibo
    Yu, Anmin
    Chapman, Mark A.
    Muraguri, Sammy
    Tan, Qing
    Wang, Wenbo
    Bao, Zhigui
    Liu, Aizhong
    Li, De-Zhu
    GENOME BIOLOGY, 2021, 22 (01)
  • [8] Genomic analyses provide insights into spinach domestication and the genetic basis of agronomic traits
    Cai, Xiaofeng
    Sun, Xuepeng
    Xu, Chenxi
    Sun, Honghe
    Wang, Xiaoli
    Ge, Chenhui
    Zhang, Zhonghua
    Wang, Quanxi
    Fei, Zhangjun
    Jiao, Chen
    Wang, Quanhua
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [9] A transcriptomic variation map provides insights into the genetic basis ofPinus massonianaLamb. evolution and the association with oleoresin yield
    Liu, Qinghua
    Xie, Yini
    Liu, Bin
    HuanhuanYin
    Zhou, Zhichun
    Feng, Zhongping
    Chen, Yadong
    BMC PLANT BIOLOGY, 2020, 20 (01)
  • [10] Structural variation provides novel insights into dog domestication
    Fuwen Wei
    National Science Review, 2019, 6 (01) : 123 - 123
12345