Genetic polymorphism analyses of 30 InDels in Chinese Xibe ethnic group and its population genetic differentiations with other groups

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作者
Hao-Tian Meng
Yu-Dang Zhang
Chun-Mei Shen
Guo-Lian Yuan
Chun-Hua Yang
Rui Jin
Jiang-Wei Yan
Hong-Dan Wang
Wen-Juan Liu
Hang Jing
Bo-Feng Zhu
机构
[1] Research Center of Stomatology,
[2] Stomatological Hospital,undefined
[3] Xi'an Jiaotong University,undefined
[4] Xi'an Jiaotong University Health Science Center,undefined
[5] Blood Center of Shaanxi Province,undefined
[6] College of Life Sciences,undefined
[7] Shaanxi Normal University,undefined
[8] Scientific Research and Experiment Center,undefined
[9] The Second Affiliated Hospital,undefined
[10] School of Medicine,undefined
[11] Xi'an Jiaotong University,undefined
[12] People's hospital of Arong Banner,undefined
[13] The Second Affiliated Hospital of Xi'an Jiaotong University,undefined
[14] Key Laboratory of Genome Sciences,undefined
[15] Beijing Institute of Genomics,undefined
[16] Chinese Academy of Sciences,undefined
[17] Medical Genetic Institute of Henan Province,undefined
[18] People's Hospital of Henan Province,undefined
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摘要
In the present study, we obtained population genetic data and forensic parameters of 30 InDel loci in Chinese Xibe ethnic group from northwestern China and studied the genetic relationships between the studied Xibe group and other reference groups. The observed heterozygosities ranged from 0.1704 at HLD118 locus to 0.5247 at HLD92 locus while the expected heterozygosities ranged from 0.1559 at HLD118 locus to 0.4997 at HLD101 locus. The cumulative power of exclusion and total probability of discrimination power in the studied group were 0.9867 and 0.9999999999902 for the 30 loci, respectively. Analyses of structure, PCA, interpopulation differentiations and phylogenetic tree revealed that the Xibe group had close genetic relationships with South Korean, Beijing Han and Guangdong Han groups. The results indicated that these 30 loci should only be used as a complement for autosomal STRs in paternity cases but could provide an acceptable level of discrimination in forensic identification cases in the studied Xibe group. Further studies should be conducted for better understanding of the Xibe genetic background.
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