Markov chain Monte Carlo Gibbs sampler approach for estimating haplotype frequencies among multiple malaria infected human blood samples

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Gie Ken-Dror
Pankaj Sharma
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[1] Royal Holloway University of London (ICR2UL),Institute of Cardiovascular Research
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Haplotype reconstruction; Multiplicity of infection; Single nucleotide polymorphisms; Markov chain Monte Carlo; Gibbs sampler algorithm; Malaria;
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  • [1] Markov chain Monte Carlo Gibbs sampler approach for estimating haplotype frequencies among multiple malaria infected human blood samples
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    [J]. MALARIA JOURNAL, 2021, 20 (01)
  • [2] Markov chain Monte Carlo and expectation maximization approaches for estimation of haplotype frequencies for multiply infected human blood samples
    Ken-Dror, Gie
    Hastings, Ian M.
    [J]. MALARIA JOURNAL, 2016, 15
  • [3] Markov chain Monte Carlo and expectation maximization approaches for estimation of haplotype frequencies for multiply infected human blood samples
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    [J]. Malaria Journal, 15
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    McNeney, B.
    Graham, J.
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  • [5] DISCUSSION ON THE MEETING ON THE GIBBS SAMPLER AND OTHER MARKOV CHAIN-MONTE CARLO METHODS
    CLIFFORD, P
    JENNISON, C
    WAKEFIELD, J
    PHILLIPS, D
    FRIGESSI, A
    GRAY, AJ
    LAWSON, A
    FORSTER, J
    RAMGOPAL, P
    ARSLAN, O
    CONSTABLE, PDL
    KENT, JT
    WOLFF, RCL
    HARDING, EF
    MIDDLETON, R
    DIGGLE, PJ
    AYKROYD, RG
    BERZUINI, C
    BREWER, M
    AITKEN, C
    CELEUX, G
    DIEBOLT, J
    CRITCHLEY, F
    DIACONIS, P
    ROSENTHAL, JS
    DIEBOLT, J
    ROBERT, CP
    GELFAND, AE
    LEE, TM
    GELMAN, A
    RUBIN, DB
    GEMAN, D
    GEWEKE, J
    GEYER, CJ
    GIGLI, A
    GIVENS, GH
    GOODALL, C
    JONALASINIO, GD
    GRIEVE, AP
    HAN, XL
    KOLASSA, JE
    TANNER, MA
    KOOPERBERG, C
    LEWIS, SM
    LIN, S
    THOMPSON, EA
    LITTON, CD
    BUCK, CE
    LIU, CH
    LIU, J
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1993, 55 (01) : 53 - 102
  • [6] Estimating demands with a Markov chain Monte Carlo approach
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    Boccelli, D. L.
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  • [7] MalHaploFreq: A computer programme for estimating malaria haplotype frequencies from blood samples
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    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-METHODOLOGICAL, 1993, 55 (01): : 3 - 23