Mutation screening in genes known to be responsible for Retinitis Pigmentosa in 98 Small Han Chinese Families

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作者
Lulin Huang
Qi Zhang
Xin Huang
Chao Qu
Shi Ma
Yao Mao
Jiyun Yang
You Li
Yuanfeng Li
Chang Tan
Peiquan Zhao
Zhenglin Yang
机构
[1] Sichuan Academy of Medical Sciences & Sichuan Provincial People’s Hospital,Sichuan Provincial Key Laboratory for Human Disease Gene Study and the Department of Laboratory Medicine
[2] School of Medicine,Institute of Chengdu Biology, and Sichuan Translational Medicine Hospital
[3] University of Electronic Science and Technology of China,Center of Information in Biomedicine
[4] Chinese Academy of Sciences,Department of Ophthalmology
[5] University of Electronic Science and Technology of China,Department of Ophthalmology
[6] XinHua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine,Department of Ophthalmology, Sichuan Academy of Medical Sciences & Sichuan Provincial People’s Hospital, School of Medicine
[7] Eye & ENT Hospital of Fudan University,undefined
[8] University of Electronic Science and Technology of China,undefined
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摘要
Retinitis pigmentosa (RP) is highly heterogeneous in both clinical and genetic fields. Accurate mutation screening is very beneficial in improving clinical diagnosis and gene-specific treatment of RP patients. The reason for the difficulties in genetic diagnosis of RP is that the ethnic-specific mutation databases that contain both clinical and genetic information are largely insufficient. In this study, we recruited 98 small Han Chinese families clinically diagnosed as RP, including of 22 dominant, 19 recessive, 52 sporadic, and five X-linked. We then used whole exome sequencing (WES) analysis to detect mutations in the genes known for RP in 101 samples from these 98 families. In total, we identified 57 potential pathogenic mutations in 40 of the 98 (41%) families in 22 known RP genes, including 45 novel mutations. We detected mutations in 13 of the 22 (59%) typical autosomal dominant families, 8 of the 19 (42%) typical autosomal recessive families, 16 of the 52 (31%) sporadic small families, and four of the five (80%) X-linked families. Our results extended the mutation spectrum of known RP genes in Han Chinese, thus making a contribution to RP gene diagnosis and the pathogenetic study of RP genes.
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