Transcriptional landscape of repetitive elements in normal and cancer human cells

被引:0
|
作者
Steven W Criscione
Yue Zhang
William Thompson
John M Sedivy
Nicola Neretti
机构
[1] Brown University,Department of Molecular Biology, Cell Biology, and Biochemistry
[2] Brown University,Division of Applied Mathematics
[3] Brown University,Center for Computational Molecular Biology
来源
BMC Genomics | / 15卷
关键词
Retrotransposon; Transposable element; Prostate cancer; LINE-1; L1; LTR; HERV; Repetitive element; RNA-seq; ChIP-seq;
D O I
暂无
中图分类号
学科分类号
摘要
引用
下载
收藏
相关论文
共 50 条
  • [1] Transcriptional landscape of repetitive elements in normal and cancer human cells
    Criscione, Steven W.
    Zhang, Yue
    Thompson, William
    Sedivy, John M.
    Neretti, Nicola
    BMC GENOMICS, 2014, 15
  • [2] Transcriptional landscape of human endogenous retroviruses (HERVs) and other repetitive elements in psoriatic skin
    Lattekivi, Freddy
    Koks, Sulev
    Keermann, Maris
    Reimann, Ene
    Prans, Ele
    Abram, Kristi
    Silm, Helgi
    Koks, Gea
    Kingo, Kulli
    SCIENTIFIC REPORTS, 2018, 8
  • [3] Transcriptional landscape of human endogenous retroviruses (HERVs) and other repetitive elements in psoriatic skin
    Freddy Lättekivi
    Sulev Kõks
    Maris Keermann
    Ene Reimann
    Ele Prans
    Kristi Abram
    Helgi Silm
    Gea Kõks
    Külli Kingo
    Scientific Reports, 8
  • [4] Widespread Chromatin Accessibility at Repetitive Elements Links Stem Cells with Human Cancer
    Gomez, Nicholas C.
    Hepperla, Austin J.
    Dumitru, Raluca
    Simon, Jeremy M.
    Fang, Fang
    Davis, Ian J.
    CELL REPORTS, 2016, 17 (06): : 1607 - 1620
  • [5] The transcriptional landscape of human liver endothelial cells
    Toledano-Sanz, Pablo
    Reventun, Paula
    Viskadourou, Maria
    Osburn, William O.
    Alcharani, Nunzio
    Lowenstein, Charles J.
    Arvanitis, Marios
    BLOOD ADVANCES, 2023, 7 (10) : 2047 - 2052
  • [6] Repetitive Elements in Mycoplasma hyopneumoniae Transcriptional Regulation
    Cattani, Amanda Malvessi
    Siqueira, Franciele Maboni
    Muniz Guedes, Rafael Lucas
    Schrank, Irene Silveira
    PLOS ONE, 2016, 11 (12):
  • [7] Transcriptional Landscape of Repetitive Elements in Psoriatic Skin from Large Cohort Studies: Relevance to Psoriasis Pathophysiology
    Krishnan, Vidya S.
    Koks, Sulev
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (23)
  • [8] Transposable Elements and the Tumor Immune Landscape in Human Cancer
    Giraldo-Castillo, Nicolas
    Daneshpajouhnejad, Parnaz
    Wang, Daphne
    Miettinen, Markku
    Cottrell, Tricia
    Taube, Janis
    Rosenberg, Avi
    Burns, Kathleen
    MODERN PATHOLOGY, 2020, 33 (SUPPL 2) : 1697 - 1697
  • [9] Transposable Elements and the Tumor Immune Landscape in Human Cancer
    Giraldo-Castillo, Nicolas
    Daneshpajouhnejad, Parnaz
    Wang, Daphne
    Miettinen, Markku
    Cottrell, Tricia
    Taube, Janis
    Rosenberg, Avi
    Burns, Kathleen
    LABORATORY INVESTIGATION, 2020, 100 (SUPPL 1) : 1697 - 1697
  • [10] Repetitive elements and stem cells
    Erwin, J. A.
    HUMAN GENE THERAPY, 2018, 29 (12) : A13 - A13