Use of designed sequences in protein structure recognition

被引：0
|
作者：
Gayatri Kumar
Richa Mudgal
Narayanaswamy Srinivasan
Sankaran Sandhya
机构：
[1] Lab 103,
[2] Molecular Biophysics Unit,undefined
[3] Indian Institute of Science,undefined
[4] Present address: Institute for Research in Biomedicine (IRB),undefined
[5] Parc Cientific de Barcelona,undefined
来源：
Biology Direct | / 13卷
关键词：
Structure recognition; Fold-assignment; Sequence-structure gap; Structural domain assignment; Function annotation; Homology detection;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] Use of designed sequences in protein structure recognition
    Kumar, Gayatri
    Mudgal, Richa
    Srinivasan, Narayanaswamy
    Sandhya, Sankaran
    BIOLOGY DIRECT, 2018, 13
  • [2] Can computationally designed protein sequences improve secondary structure prediction?
    Bondugula, Rajkumar
    Wallqvist, Anders
    Lee, Michael S.
    PROTEIN ENGINEERING DESIGN & SELECTION, 2011, 24 (05): : 455 - 461
  • [3] Improved recognition of native-like protein structures using a family of designed sequences
    Koehl, P
    Levitt, M
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (02) : 691 - 696
  • [4] Neutrality and evolvability of designed protein sequences
    Bhattacherjee, Arnab
    Biswas, Parbati
    PHYSICAL REVIEW E, 2010, 82 (01):
  • [5] Insights into the role of protein molecule size and structure on interfacial properties using designed sequences
    Dwyer, Mirjana Dimitrijev
    He, Lizhong
    James, Michael
    Nelson, Andrew
    Middelberg, Anton P. J.
    JOURNAL OF THE ROYAL SOCIETY INTERFACE, 2013, 10 (80)
  • [6] A SMALL DESIGNED PROTEIN AS A POTENTIAL SOURCE OF SELECTABLE PEPTIDE SEQUENCES OF KNOWN STRUCTURE - THE MINIBODY
    BIANCHI, E
    PESSI, A
    TRAMONTANO, A
    SOLLAZZO, M
    JOURNAL OF CELLULAR BIOCHEMISTRY, 1993, : 213 - 213
  • [7] Peptide and protein recognition by designed molecules
    Peczuh, MW
    Hamilton, AD
    CHEMICAL REVIEWS, 2000, 100 (07) : 2479 - 2493
  • [8] USE OF HOMOLOGOUS SEQUENCES TO IMPROVE PROTEIN SECONDARY STRUCTURE PREDICTION
    NIERMANN, T
    KIRSCHNER, K
    METHODS IN ENZYMOLOGY, 1991, 202 : 45 - 59
  • [9] Simple electrostatic model improves designed protein sequences
    Zollars, Eric S.
    Marshall, Shannon A.
    Mayo, Stephen L.
    PROTEIN SCIENCE, 2006, 15 (08) : 2014 - 2018
  • [10] PROTEIN RECOGNITION BY A RATIONALLY DESIGNED SYNTHETIC ANTIBODY
    MALLIK, S
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1995, 210 : 408 - ORGN
12345