In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalus bubalis) and development of first BuffSatDB

被引:0
|
作者
Vasu Sarika
Mir Asif Arora
Anil Iquebal
Dinesh Rai
机构
[1] Indian Agricultural Statistics Research Institute,Centre for Agricultural Bioinformatics
[2] Indian Agricultural Statistics Research Institute,Division of Biometrics & Statistical Modelling
[3] National Bureau of Animal Genetic Resources,Genes & Genetic Resources Molecular Analysis Lab
来源
BMC Genomics | / 14卷
关键词
Microsatellites; Primers; Radiation hybrid; Water buffalo;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 32 条
  • [1] In silico mining of putative microsatellite markers from whole genome sequence of water buffalo (Bubalus bubalis) and development of first BuffSatDB
    Sarika
    Arora, Vasu
    Iquebal, Mir Asif
    Rai, Anil
    Kumar, Dinesh
    BMC GENOMICS, 2013, 14
  • [2] Whole-genome sequence assembly of the water buffalo (Bubalus bubalis)
    Tantia, M. S.
    Vijh, R. K.
    Bhasin, V.
    Sikka, Poonam
    Vij, P. K.
    Kataria, R. S.
    Mishra, B. P.
    Yadav, S. P.
    Pandey, A. K.
    Sethi, R. K.
    Joshi, B. K.
    Gupta, S. C.
    Pathak, K. M. L.
    INDIAN JOURNAL OF ANIMAL SCIENCES, 2011, 81 (05): : 465 - 473
  • [3] Microsatellite markers of water buffalo, Bubalus bubalis - development, characterisation and linkage disequilibrium studies
    Nagarajan, Muniyandi
    Kumar, Niraj
    Nishanth, Gopala
    Haribaskar, Ramachandran
    Paranthaman, Karthikeyani
    Gupta, Jalaj
    Mishra, Manish
    Vaidhegi, R.
    Kumar, Shantanu
    Ranjan, Amresh K.
    Kumar, Satish
    BMC GENETICS, 2009, 10 : 68
  • [4] Microsatellite markers of water buffalo, Bubalus bubalis - development, characterisation and linkage disequilibrium studies
    Muniyandi Nagarajan
    Niraj Kumar
    Gopala Nishanth
    Ramachandran Haribaskar
    Karthikeyani Paranthaman
    Jalaj Gupta
    Manish Mishra
    R Vaidhegi
    Shantanu Kumar
    Amresh K Ranjan
    Satish Kumar
    BMC Genetics, 10
  • [5] Water buffalo (Bubalus bubalis):: Complete nucleotide mitochondrial genome sequence
    Parma, P
    Erra-Pujada, M
    Feligini, M
    Greppi, G
    Enne, G
    DNA SEQUENCE, 2004, 15 (5-6): : 369 - 373
  • [6] A set of cattle microsatellite DNA markers for genome analysis of riverine buffalo (Bubalus bubalis)
    Navani, N
    Jain, PK
    Gupta, S
    Sisodia, BS
    Kumar, S
    ANIMAL GENETICS, 2002, 33 (02) : 149 - 154
  • [7] Whole-Genome-Based Web Genomic Resource for Water Buffalo (Bubalus bubalis)
    Khan, Aamir
    Singh, Kalpana
    Jaiswal, Sarika
    Raza, Mustafa
    Jasrotia, Rahul Singh
    Kumar, Animesh
    Gurjar, Anoop Kishor Singh
    Kumari, Juli
    Nayan, Varij
    Iquebal, Mir Asif
    Angadi, U. B.
    Rai, Anil
    Datta, Tirtha Kumar
    Kumar, Dinesh
    FRONTIERS IN GENETICS, 2022, 13
  • [8] Genetic Diversity Analysis of Water Buffalo (Bubalus bubalis L.) Populations in the Philippines Using Bovine Microsatellite Markers
    Cacho, Roxan Grace C.
    Han, Jung Min
    Herrera, Jesus Rommel V.
    Oh, Jae-Don
    Seong, Jiyeon
    Song, Ki-Duk
    Cruz, Libertado C.
    Kong, Hong Sik
    Lee, Hak Kyo
    PHILIPPINE JOURNAL OF VETERINARY MEDICINE, 2013, 50 (01): : 7 - 15
  • [9] First molecular characterisation of Cryptosporidium and Giardia from Bubalus bubalis (water buffalo) in Victoria, Australia
    Abeywardena, Harshanie
    Jex, Aaron R.
    von Samson-Himmelstjerna, Georg
    Haydon, Shane R.
    Stevens, Melita A.
    Gasser, Robin B.
    INFECTION GENETICS AND EVOLUTION, 2013, 20 : 96 - 102
  • [10] Complete genome sequence of Trueperella pyogenes strain Arash114, isolated from the uterus of a water buffalo (Bubalus bubalis) in Iran
    Ashrafi Tamai, Iradj
    Mohammadzadeh, Abdolmajid
    Ghalyanchi Langeroudi, Arash
    Mahmoodi, Pezhman
    Ziafati Kafi, Zahra
    Pakbin, Babak
    Zahraei Salehi, Taghi
    BMC RESEARCH NOTES, 2021, 14 (01)