A computational approach to design a polyvalent vaccine against human respiratory syncytial virus

被引:8
|
作者
Moin, Abu Tayab [1 ]
Ullah, Asad [2 ]
Patil, Rajesh B. [3 ]
Faruqui, Nairita Ahsan [4 ]
Araf, Yusha [5 ]
Das, Sowmen [6 ]
Uddin, Khaza Md. Kapil [1 ]
Hossain, Shakhawat [1 ]
Miah, Faruque [5 ]
Moni, Mohammad Ali [7 ,8 ,9 ]
Chowdhury, Dil Umme Salma [1 ]
Islam, Saiful [10 ]
机构
[1] Univ Chittagong, Fac Biol Sci, Dept Genet Engn & Biotechnol, Chattogram, Bangladesh
[2] Jahangirnagar Univ, Fac Biol Sci, Dept Biotechnol & Genet Engn, Savar, Dhaka, Bangladesh
[3] Sinhgad Coll Pharm, Dept Pharmaceut Chem, Sinhgad Tech Educ Soc, Pune, Maharashtra, India
[4] BRAC Univ, Sch Data & Sci, Dept Math & Nat Sci, Biotechnol Program, Dhaka, Bangladesh
[5] Shahjalal Univ Sci & Technol, Sch Life Sci, Dept Genet Engn & Biotechnol, Sylhet, Bangladesh
[6] Shahjalal Univ Sci & Technol, Sch Phys Sci, Dept Comp Sci & Engn, Sylhet, Bangladesh
[7] Garvan Inst Med Res, Bone Biol Div, Darlinghurst, NSW, Australia
[8] UNSW Sydney, WHO Collaborating Ctr Ehlth, Sch Publ Hlth & Community Med, UNSW Digital Hlth,Fac Med, Sydney, Australia
[9] Univ Queensland, Fac Hlth & Behav Sci, Sch Hlth & Rehabil Sci, Artificial Intelligence & Data Sci, Brisbane, Australia
[10] Bangladesh Council Sci & Ind Res BCSIR, Chattogram Labs, Chattogram, Bangladesh
关键词
PROTEIN SECONDARY STRUCTURE; STRUCTURE PREDICTION; MOLECULAR-DYNAMICS; WEB SERVER; SEQUENCE; DISULFIDE; MODEL; TOLL-LIKE-RECEPTOR-1; PATHOGENESIS; RECOGNITION;
D O I
10.1038/s41598-023-35309-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Human Respiratory Syncytial Virus (RSV) is one of the leading causes of lower respiratory tract infections (LRTI), responsible for infecting people from all age groups-a majority of which comprises infants and children. Primarily, severe RSV infections are accountable for multitudes of deaths worldwide, predominantly of children, every year. Despite several efforts to develop a vaccine against RSV as a potential countermeasure, there has been no approved or licensed vaccine available yet, to control the RSV infection effectively. Therefore, through the utilization of immunoinformatics tools, a computational approach was taken in this study, to design a multi-epitope polyvalent vaccine against two major antigenic subtypes of RSV, RSV-A and RSV-B. Potential predictions of the T-cell and B-cell epitopes were followed by extensive tests of antigenicity, allergenicity, toxicity, conservancy, homology to human proteome, transmembrane topology, and cytokine-inducing ability. The peptide vaccine was modeled, refined, and validated. Molecular docking analysis with specific Toll-like receptors (TLRs) revealed excellent interactions with suitable global binding energies. Additionally, molecular dynamics (MD) simulation ensured the stability of the docking interactions between the vaccine and TLRs. Mechanistic approaches to imitate and predict the potential immune response generated by the administration of vaccines were determined through immune simulations. Subsequent mass production of the vaccine peptide was evaluated; however, there remains a necessity for further in vitro and in vivo experiments to validate its efficacy against RSV infections.
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页数:20
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