Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis

被引：0
|
作者：
Kasper Thorsen
Troels Schepeler
Bodil Øster
Mads H Rasmussen
Søren Vang
Kai Wang
Kristian Q Hansen
Philippe Lamy
Jakob Skou Pedersen
Asger Eller
Francisco Mansilla
Kirsti Laurila
Carsten Wiuf
Søren Laurberg
Lars Dyrskjøt
Torben F Ørntoft
Claus L Andersen
机构：
[1] Aarhus University Hospital,Department of Molecular Medicine
[2] Harvard University,Department of Biostatistics and Computational Biology, Dana
[3] Harvard University,Farber Cancer Institute, Harvard School of Public Health
[4] Aarhus University,Department of Radiology, Harvard Medical School
[5] Tampere University of Technology,Bioinformatics Research Centre (BiRC)
[6] Aarhus University Hospital,Department of Signal Processing
[7] THG,Department of Surgery P
来源：
BMC Genomics | / 12卷
关键词：
DLD1 Cell; Exon Array; Brain Glioma; Alternative Transcription Start Site; Alternative Promoter Usage;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysis
    Thorsen, Kasper
    Schepeler, Troels
    Oster, Bodil
    Rasmussen, Mads H.
    Vang, Soren
    Wang, Kai
    Hansen, Kristian Q.
    Lamy, Philippe
    Pedersen, Jakob Skou
    Eller, Asger
    Mansilla, Francisco
    Laurila, Kirsti
    Wiuf, Carsten
    Laurberg, Soren
    Dyrskjot, Lars
    Orntoft, Torben F.
    Andersen, Claus L.
    [J]. BMC GENOMICS, 2011, 12
  • [2] Genome-wide analysis of antisense transcription with Affymetrix exon array
    Xijin Ge
    Wendy S Rubinstein
    Yong-chul Jung
    Qingfa Wu
    [J]. BMC Genomics, 9
  • [3] Genome-wide analysis of antisense transcription with Affymetrix exon array
    Ge, Xijin
    Rubinstein, Wendy S.
    Jung, Yong-Chul
    Wu, Qingfa
    [J]. BMC GENOMICS, 2008, 9 (1)
  • [4] Genome-Wide Analysis of the Transcription Start Sites and Promoter Motifs of Phytoplasmas
    Nijo, Takamichi
    Neriya, Yutaro
    Koinuma, Hiroaki
    Iwabuchi, Nozomu
    Kitazawa, Yugo
    Tanno, Kazuyuki
    Okano, Yukari
    Maejima, Kensaku
    Yamaji, Yasuyuki
    Oshima, Kenro
    Namba, Shigetou
    [J]. DNA AND CELL BIOLOGY, 2017, 36 (12) : 1081 - 1092
  • [5] Genome-Wide Prediction of Transcription Start Sites in Conifers
    Bondar, Eugeniya I.
    Troukhan, Maxim E.
    Krutovsky, Konstantin V.
    Tatarinova, Tatiana V.
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (03)
  • [6] Where To Begin? Mapping Transcription Start Sites Genome-Wide in Escherichia coli
    Wade, Joseph T.
    [J]. JOURNAL OF BACTERIOLOGY, 2015, 197 (01) : 4 - 6
  • [7] Genome-Wide Transcription Start Sites Mapping in Methylorubrum Grown with Dichloromethane and Methanol
    Maucourt, Bruno
    Roche, David
    Chaignaud, Pauline
    Vuilleumier, Stephane
    Bringel, Francoise
    [J]. MICROORGANISMS, 2022, 10 (07)
  • [8] Genome-wide DNA methylation, transcription, and mutation analysis of the colorectal cancer epigenome
    Fennell, L.
    Dumenil, T.
    Patch, A-M
    Kazakoff, S.
    Nones, K.
    Hartel, G.
    Bond, C.
    Bowdler, L.
    Montgomery, G.
    Wockner, L.
    Klein, K.
    Mckeone, D.
    Shao, R.
    Wirapati, P.
    Tejpar, S.
    Pearson, J.
    Waddell, N.
    Leggett, B. A.
    Whitehall, V. L. J.
    [J]. JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2018, 33 : 17 - 17
  • [9] Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli
    Mendoza-Vargas, Alfredo
    Olvera, Leticia
    Olvera, Maricela
    Grande, Ricardo
    Vega-Alvarado, Leticia
    Taboada, Blanca
    Jimenez-Jacinto, Veronica
    Salgado, Heladia
    Juarez, Katy
    Contreras-Moreira, Bruno
    Huerta, Araceli M.
    Collado-Vides, Julio
    Morett, Enrique
    [J]. PLOS ONE, 2009, 4 (10):
  • [10] Genome wide identification of transcriptional start sites in human colorectal cancer
    Hashimoto, Shin-ichi
    Matsushima, K.
    [J]. INFLAMMATION RESEARCH, 2007, 56 : S459 - S460
12345