MMC and LD simulations of α-D-Glcp-(1→2)-α-D-Glcp-(1→3)-α-D-Glcp-OMe. A model for the terminal trisaccharide in glycoprotein precursors

被引:0
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作者
Roland Stenutz
Goran Widmalm
机构
[1] Stockholm University,Department of Organic Chemistry, Arrhenius Laboratory
来源
Glycoconjugate Journal | 1998年 / 15卷
关键词
conformation; flexibility; Metropolis-Monte Carlo; Langevin dynamics; hydrogen bond;
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学科分类号
摘要
The conformational flexibility and the dynamics of α-D-Glcp-(1→2)-α-D-Glcp-(1→3)-α-D-Glcp-OMe (I) has been investigated by Metropolis-Monte Carlo with the HSEA (Hard Sphere Exo-Anomeric) force field and Langevin dynamics simulations employing two different CHARMm (Chemistry at HARvard Molecular Mechanics) force fields, CHEAT95 and PARM22. The conformational space spanned by the molecule is similar for the two former force fields but differ significantly for the latter. Hydrogen bonding between O2″ and O4 of the title compound is analysed in comparison to NMR and preliminary results from X-ray powder diffraction studies. © 1998 Rapid Science Ltd
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页码:415 / 418
页数:3
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