Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk

被引:0
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作者
Nick Shrine
Abril G. Izquierdo
Jing Chen
Richard Packer
Robert J. Hall
Anna L. Guyatt
Chiara Batini
Rebecca J. Thompson
Chandan Pavuluri
Vidhi Malik
Brian D. Hobbs
Matthew Moll
Wonji Kim
Ruth Tal-Singer
Per Bakke
Katherine A. Fawcett
Catherine John
Kayesha Coley
Noemi Nicole Piga
Alfred Pozarickij
Kuang Lin
Iona Y. Millwood
Zhengming Chen
Liming Li
Sara R. A. Wijnant
Lies Lahousse
Guy Brusselle
Andre G. Uitterlinden
Ani Manichaikul
Elizabeth C. Oelsner
Stephen S. Rich
R. Graham Barr
Shona M. Kerr
Veronique Vitart
Michael R. Brown
Matthias Wielscher
Medea Imboden
Ayoung Jeong
Traci M. Bartz
Sina A. Gharib
Claudia Flexeder
Stefan Karrasch
Christian Gieger
Annette Peters
Beate Stubbe
Xiaowei Hu
Victor E. Ortega
Deborah A. Meyers
Eugene R. Bleecker
Stacey B. Gabriel
机构
[1] University of Leicester,Department of Population Health Sciences
[2] University of Nottingham,Division of Respiratory Medicine and NIHR Nottingham Biomedical Research Centre
[3] Glenfield Hospital,Leicester National Institute for Health and Care Research, Biomedical Research Centre
[4] Brigham and Women’s Hospital,Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine
[5] Harvard Medical School,Department of Clinical Science
[6] COPD Foundation,Nuffield Department of Population Health
[7] Unversity of Bergen,MRC Population Health Research Unit
[8] University of Oxford,Department of Epidemiology and Biostatistics, School of Public Health
[9] University of Oxford,Department of Respiratory Diseases
[10] Peking University Health Science Center,Department of Bioanalysis, Faculty of Pharmaceutical Sciences
[11] Ghent Universital Hospital,Department of Epidemiology
[12] Ghent University,Department of Internal Medicine
[13] Eramus Medical Center,Center for Public Health Genomics
[14] Eramus Medical Center,Department of Medicine
[15] University of Virginia,Medical Research Council Human Genetics Unit, Institute of Genetics and Cancer
[16] Columbia University Medical Center,Human Genetics Center, Department of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health
[17] University of Edinburgh,MRC Centre for Environment and Health, Department of Epidemiology and Biostatistics, School of Public Health
[18] The University of Texas Health Science Center at Houston,Department of Epidemiology and Public Health
[19] Imperial College London,Department of Public Health
[20] Swiss Tropical and Public Health Institute,Cardiovascular Health Research Unit, Departments of Medicine and Biostatistics
[21] University of Basel,Computational Medicine Core, Center for Lung Biology, Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine
[22] University of Washington,Institute and Clinic for Occupational, Social and Environmental Medicine
[23] University of Washington,Comprehensive Pneumology Center Munich (CPC
[24] University Hospital,M)
[25] LMU Munich,Institute of Epidemiology
[26] German Center for Lung Research (DZL),Research Unit of Molecular Epidemiology
[27] Helmholtz Zentrum München–German Research Center for Environmental Health,Institute for Medical Information Processing, Biometry and Epidemiology, Medical Faculty
[28] Helmholtz Zentrum München–German Research Center for Environmental Health,Department of Internal Medicine B–Cardiology, Intensive Care, Pulmonary Medicine and Infectious Diseases
[29] Ludwig Maximilian University,Division of Respiratory Medicine, Department of Internal Medicine, Center for Individualized Medicine
[30] University Medicine Greifswald,Department of Medicine
[31] Mayo Clinic,Department of Biostatistics
[32] University of Arizona,Center for Statistical Genetics
[33] Broad Institute of MIT and Harvard,MRC Epidemiology Unit, Institute of Metabolic Science, School of Clinical Medicine
[34] University of Michigan School of Public Health,Department of Public and Primary Care, Heart and Lung Research Institute
[35] University of Michigan School of Public Health,K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing
[36] University of Cambridge,HUNT Research Centre, Department of Public Health and Nursing
[37] University of Cambridge,Levanger Hospital
[38] NTNU Norwegian University of Science and Technology,Division of Cardiology, Department of Internal Medicine
[39] NTNU Norwegian University of Science and Technology,Department of Biostatistics and Center for Statistical Genetics
[40] Nord-Trøndelag Hospital Trust,Department of Human Genetics
[41] University of Michigan,Centre for Genomic and Experimental Medicine, Institute of Genetics and Cancer
[42] University of Michigan,Division of Population Health and Genomics, Ninewells Hospital and Medical School
[43] University of Michigan,Division of Sleep and Circadian Disorders
[44] University of Edinburgh,Department of Medicine
[45] University of Dundee,Department of Biostatistics
[46] Brigham and Women’s Hospital,Institute for Minority Health Research
[47] Harvard Medical School,Human Genetics Center, Department of Epidemiology, Human Genetics and Environmental Sciences, School of Public Health
[48] Harvard T.H. Chan School of Public Health,Department of Biostatistics, School of Public Health
[49] University of Illinois at Chicago,Pulmonary Center, School of Medicine
[50] University of Texas Health Science Center at Houston,Bioinformatics Core, Weill Cornell Medicine–Qatar
来源
Nature Genetics | 2023年 / 55卷
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摘要
Lung-function impairment underlies chronic obstructive pulmonary disease (COPD) and predicts mortality. In the largest multi-ancestry genome-wide association meta-analysis of lung function to date, comprising 588,452 participants, we identified 1,020 independent association signals implicating 559 genes supported by ≥2 criteria from a systematic variant-to-gene mapping framework. These genes were enriched in 29 pathways. Individual variants showed heterogeneity across ancestries, age and smoking groups, and collectively as a genetic risk score showed strong association with COPD across ancestry groups. We undertook phenome-wide association studies for selected associated variants as well as trait and pathway-specific genetic risk scores to infer possible consequences of intervening in pathways underlying lung function. We highlight new putative causal variants, genes, proteins and pathways, including those targeted by existing drugs. These findings bring us closer to understanding the mechanisms underlying lung function and COPD, and should inform functional genomics experiments and potentially future COPD therapies.
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页码:410 / 422
页数:12
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  • [1] Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk
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    [J]. NATURE GENETICS, 2023, 55 (03) : 410 - +
  • [2] Author Correction: Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk
    Nick Shrine
    Abril G. Izquierdo
    Jing Chen
    Richard Packer
    Robert J. Hall
    Anna L. Guyatt
    Chiara Batini
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    Chandan Pavuluri
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