In the present research, accumulation of Cd, Co, Cr, Cu, Mn, Ni, Pb, V, and Zn were determined in sediments and fillet, liver, kidney, gonads, and gills of three commonly fish species in the largest wetland ecosystem that is located in southwest of Iran; Shadegan wetland. Shadegan is one of the most important wetland that posses various fauna and flora but suffers inputs from agricultural and industrial activities. So, sediment samples and fish species including Barbus grypus, Barbus sharpeyi, and Cyprinus carpio were collected during winter 2009. Results showed that mean concentrations of trace elements (except Ni and Co) were high in liver and gills of B. grypus. Also trace elements had the most accumulation in liver of B. sharpeyi except for Cd (0.26 mg kg − 1 d.w.) and Mn (13.45 mg kg − 1 d.w.) that were high in gills. Beside, kidney is determined as target tissue for Ni and V in B. grypus and for Pb in C. carpio, due to their high concentration. Zn levels in all tissues of C. carpio showed the highest concentrations in comparison to other fish species. Generally, accumulations of most of the studied elements in B. grypus and B. sharpeyi were higher in females than in males, while in fillet and gonads of C. carpio, this trend was inverted. Bioaccumulation factors (BAFs) were determined for different tissues of fish species with respect to elemental concentrations in sediment. BAFs results indicated that Zn, Pb, and Cu have higher BAF than other elements. Also this investigation demonstrated that trace elements have different affinities with condition factor of studied fish species. Gonadosomatic index (GSI) and Pb showed positive correlation together in both B. sharpeyi and B. grypus, respectively, in females and males. Moreover, females of C. carpio showed significantly positive relation of GSI and all studied elements.
