Does antiretroviral treatment change HIV-1 codon usage patterns in its genes: a preliminary bioinformatics study

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作者
Navaneethan Palanisamy
Nathan Osman
Frédéric Ohnona
Hong-Tao Xu
Bluma Brenner
Thibault Mesplède
Mark A. Wainberg
机构
[1] McGill University AIDS Centre,Department of Microbiology and Immunology, Faculty of Medicine
[2] Lady Davis Institute for Medical Research,The Hartmut Hoffmann
[3] Jewish General Hospital,Berling International Graduate School of Molecular and Cellular Biology (HBIGS)
[4] McGill University,Molecular and Cellular Engineering Group
[5] University of Heidelberg,undefined
[6] BioQuant,undefined
[7] University of Heidelberg,undefined
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HIV-1; Codon usage frequency; Bioinformatics; Antiretroviral therapy; Resistance;
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