Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

被引：0

作者：

Steven L Salzberg

Daniel D Sommer

Michael C Schatz

Adam M Phillippy

Pablo D Rabinowicz

Seiji Tsuge

Ayako Furutani

Hirokazu Ochiai

Arthur L Delcher

David Kelley

Ramana Madupu

Daniela Puiu

Diana Radune

Martin Shumway

Cole Trapnell

Gudlur Aparna

Gopaljee Jha

Alok Pandey

Prabhu B Patil

Hiromichi Ishihara

Damien F Meyer

Boris Szurek

Valerie Verdier

Ralf Koebnik

J Maxwell Dow

Robert P Ryan

Hisae Hirata

Shinji Tsuyumu

Sang Won Lee

Pamela C Ronald

Ramesh V Sonti

Marie-Anne Van Sluys

Jan E Leach

Frank F White

Adam J Bogdanove

机构：

[1] University of Maryland,Center for Bioinformatics and Computational Biology

[2] The Institute for Genomic Research,Institute for Genome Sciences

[3] University of Maryland,Laboratory of Plant Pathology

[4] Kyoto Prefectural University,Department of Genetic Resources

[5] National Institute of Agrobiological Sciences,National Center for Biotechnology Information

[6] J. Craig Venter Institute,Centre for Cellular and Molecular Biology

[7] National Institutes of Health,Institute of Himalayan Bioresource Technology

[8] Council of Scientific and Industrial Research,Department of Bioagricultural Sciences and Pest Management

[9] Council of Scientific and Industrial Research,Department of Plant Pathology

[10] Colorado State University,BIOMERIT Research Centre, BioSciences Institute

[11] Iowa State University,Graduate School of Natural Science & Technology

[12] Institut de la Recherche pour le Developpement,Department of Plant Pathology

[13] University College Cork,Department of Plant Pathology

[14] Shizuoka University,undefined

[15] UC Davis,undefined

[16] Departamento de Botânica,undefined

[17] Kansas State University,undefined

来源：

BMC Genomics | / 9卷

关键词：

Insertion Sequence; Lateral Gene Transfer; Bacterial Blight; Bacterial Blight Resistance; Major Rearrangement;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

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[1] Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
Salzberg, Steven L.
Sommer, Daniel D.
Schatz, Michael C.
Phillippy, Adam M.
Rabinowicz, Pablo D.
Tsuge, Seiji
Furutani, Ayako
Ochiai, Hirokazu
Delcher, Arthur L.
Kelley, David
Madupu, Ramana
Puiu, Daniela
Radune, Diana
Shumway, Martin
Trapnell, Cole
Aparna, Gudlur
Jha, Gopaljee
Pandey, Alok
Patil, Prabhu B.
Ishihara, Hiromichi
Meyer, Damien F.
Szurek, Boris
Verdier, Valerie
Koebnik, Ralf
Dow, J. Maxwell
Ryan, Robert P.
Hirata, Hisae
Tsuyumu, Shinji
Lee, Sang Won
Ronald, Pamela C.
Sonti, Ramesh V.
Van Sluys, Marie-Anne
Leach, Jan E.
White, Frank F.
Bogdanove, Adam J.
[J]. BMC GENOMICS, 2008, 9 (1)
[2] Erratum to: Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
Steven L Salzberg
Daniel D Sommer
Michael C Schatz
Adam M Phillippy
Pablo D Rabinowicz
Seiji Tsuge
Ayako Furutani
Hirokazu Ochiai
Arthur L Delcher
David Kelley
Ramana Madupu
Daniela Puiu
Diana Radune
Martin Shumway
Cole Trapnell
Gudlur Aparna
Gopaljee Jha
Alok Pandey
Prabhu B Patil
Hiromichi Ishihara
Damien F Meyer
Boris Szurek
Valerie Verdier
Ralf Koebnik
J Maxwell Dow
Robert P Ryan
Hisae Hirata
Shinji Tsuyumu
Sang Won Lee
Young-Su Seo
Malinee Sriariyanum
Pamela C Ronald
Ramesh V Sonti
Marie-Anne Van Sluys
Jan E Leach
Frank F White
Adam J Bogdanove
[J]. BMC Genomics, 9
[3] Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A (vol 9, pg 534, 2008)
Salzberg, Steven L.
Sommer, Daniel D.
Schatz, Michael C.
Phillippy, Adam M.
Rabinowicz, Pablo D.
Tsuge, Seiji
Furutani, Ayako
Ochiai, Hirokazu
Delcher, Arthur L.
Kelley, David
Madupu, Ramana
Puiu, Daniela
Radune, Diana
Shumway, Martin
Trapnell, Cole
Aparna, Gudlur
Jha, Gopaljee
Pandey, Alok
Patil, Prabhu B.
Ishihara, Hiromichi
Meyer, Damien F.
Szurek, Boris
Verdier, Valerie
Koebnik, Ralf
Dow, J. Maxwell
Ryan, Robert P.
Hirata, Hisae
Tsuyumu, Shinji
Lee, Sang Won
Seo, Young-Su
Sriariyanum, Malinee
Ronald, Pamela C.
Sonti, Ramesh V.
Van Sluys, Marie-Anne
Leach, Jan E.
White, Frank F.
Bogdanove, Adam J.
[J]. BMC GENOMICS, 2008, 9 (1)
[4] Improved annotation of a plant pathogen genome Xanthomonas oryzae pv. oryzae PXO99A
Lei, Yang
Kang, Shou-Kai
Gao, Junxiang
Jia, Xi-Shuai
Chen, Ling-Ling
[J]. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2013, 31 (03): : 342 - 350
[5] Genome subtraction for the identification of potential antimicrobial targets in Xanthomonas oryzae pv. oryzae PXO99A pathogenic to rice
Keshri, V.
Singh, Dhananjaya P.
Prabha, R.
Rai, A.
Sharma, A. K.
[J]. 3 BIOTECH, 2014, 4 (01): : 91 - 95
[6] Genome subtraction for the identification of potential antimicrobial targets in Xanthomonas oryzae pv. oryzae PXO99A pathogenic to rice
V. Keshri
Dhananjaya P. Singh
R. Prabha
A. Rai
A. K. Sharma
[J]. 3 Biotech, 2014, 4 : 91 - 95
[7] Complete Genome Resource of a Commonly Used Laboratory Substrain of Xanthomonas oryzae pv. oryzae PXO99A
Li, Yiming
Dan, Xue
Li, Tianjiao
Wu, Qiaozhi
Wang, Zihao
Xu, Lidan
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Jiang, Wei
He, Yong-Qiang
[J]. PLANT DISEASE, 2022, 106 (03) : 1045 - 1048
[8] Prediction and characterization of protein-protein interaction network in Xanthomonas oryzae pv. oryzae PXO99A
Guo, Jing
Li, Huan
Chang, Ji-Wei
Lei, Yang
Li, Sen
Chen, Ling-Ling
[J]. RESEARCH IN MICROBIOLOGY, 2013, 164 (10) : 1035 - 1044
[9] OsBAK1 is involved in rice resistance to Xanthomonas oryzae pv. oryzae PXO99
Hualan Liao
Xiaorong Xiao
Xiuqiong Li
Yan Chen
Xiumei Fu
Daozhe Lin
Xiaolei Niu
Yinhua Chen
Chaozu He
[J]. Plant Biotechnology Reports, 2016, 10 : 75 - 82
[10] OsBAK1 is involved in rice resistance to Xanthomonas oryzae pv. oryzae PXO99
Liao, Hualan
Xiao, Xiaorong
Li, Xiuqiong
Chen, Yan
Fu, Xiumei
Lin, Daozhe
Niu, Xiaolei
Chen, Yinhua
He, Chaozu
[J]. PLANT BIOTECHNOLOGY REPORTS, 2016, 10 (02) : 75 - 82

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