Computed tomography-based automated measurement of abdominal aortic aneurysm using semantic segmentation with active learning

被引:3
|
作者
Kim, Taehun [1 ,2 ]
On, Sungchul [1 ,3 ]
Gwon, Jun Gyo [4 ]
Kim, Namkug [1 ,5 ]
机构
[1] Univ Ulsan, Asan Med Inst Convergence Sci & Technol, Asan Med Ctr, Dept Convergence Med,Coll Med, 88,Olympic Ro 43 Gil, Seoul 05505, South Korea
[2] Korea Inst Sci & Technol, Artificial Intelligence & Robot Inst, Seoul, South Korea
[3] Univ Ulsan, Asan Med Inst Convergence Sci & Technol, Asan Med Ctr, Dept Biomed Engn,Coll Med, Seoul, South Korea
[4] Univ Ulsan, Coll Med, Asan Med Ctr, Div Vasc Surg,Dept Surg, 88,Olympic Ro 43 Gil, Seoul 05505, South Korea
[5] Univ Ulsan, Coll Med, Asan Med Ctr, Dept Radiol, Seoul, South Korea
来源
SCIENTIFIC REPORTS | 2024年 / 14卷 / 01期
关键词
Abdominal aortic aneurysm; Active learning; Application programming interface; Computer-aided design; Deep learning; Endovascular abdominal repair stent graft;
D O I
10.1038/s41598-024-59735-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Accurate measurement of abdominal aortic aneurysm is essential for selecting suitable stent-grafts to avoid complications of endovascular aneurysm repair. However, the conventional image-based measurements are inaccurate and time-consuming. We introduce the automated workflow including semantic segmentation with active learning (AL) and measurement using an application programming interface of computer-aided design. 300 patients underwent CT scans, and semantic segmentation for aorta, thrombus, calcification, and vessels was performed in 60-300 cases with AL across five stages using UNETR, SwinUNETR, and nnU-Net consisted of 2D, 3D U-Net, 2D-3D U-Net ensemble, and cascaded 3D U-Net. 7 clinical landmarks were automatically measured for 96 patients. In AL stage 5, 3D U-Net achieved the highest dice similarity coefficient (DSC) with statistically significant differences (p < 0.01) except from the 2D-3D U-Net ensemble and cascade 3D U-Net. SwinUNETR excelled in 95% Hausdorff distance (HD95) with significant differences (p < 0.01) except from UNETR and 3D U-Net. DSC of aorta and calcification were saturated at stage 1 and 4, whereas thrombus and vessels were continuously improved at stage 5. The segmentation time between the manual and AL-corrected segmentation using the best model (3D U-Net) was reduced to 9.51 +/- 1.02, 2.09 +/- 1.06, 1.07 +/- 1.10, and 1.07 +/- 0.97 min for the aorta, thrombus, calcification, and vessels, respectively (p < 0.001). All measurement and tortuosity ratio measured - 1.71 +/- 6.53 mm and - 0.15 +/- 0.25. We developed an automated workflow with semantic segmentation and measurement, demonstrating its efficiency compared to conventional methods.
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页数:13
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