Phase imaging with computational specificity (PICS) for measuring dry mass changes in sub-cellular compartments

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作者
Mikhail E. Kandel
Yuchen R. He
Young Jae Lee
Taylor Hsuan-Yu Chen
Kathryn Michele Sullivan
Onur Aydin
M. Taher A. Saif
Hyunjoon Kong
Nahil Sobh
Gabriel Popescu
机构
[1] University of Illinois at Urbana-Champaign,Beckman Institute
[2] University of Illinois at Urbana-Champaign,Department of Electrical and Computer Engineering
[3] University of Illinois at Urbana-Champaign,Neuroscience Program
[4] University of Illinois at Urbana-Champaign,Department of Bioengineering
[5] University of Illinois at Urbana-Champaign,Department of Mechanical Science and Engineering
[6] University of Illinois at Urbana-Champaign,Chemical and Biomolecular Engineering
[7] University of Illinois at Urbana-Champaign,Carl Woese Institute for Genomic Biology
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Due to its specificity, fluorescence microscopy has become a quintessential imaging tool in cell biology. However, photobleaching, phototoxicity, and related artifacts continue to limit fluorescence microscopy’s utility. Recently, it has been shown that artificial intelligence (AI) can transform one form of contrast into another. We present phase imaging with computational specificity (PICS), a combination of quantitative phase imaging and AI, which provides information about unlabeled live cells with high specificity. Our imaging system allows for automatic training, while inference is built into the acquisition software and runs in real-time. Applying the computed fluorescence maps back to the quantitative phase imaging (QPI) data, we measured the growth of both nuclei and cytoplasm independently, over many days, without loss of viability. Using a QPI method that suppresses multiple scattering, we measured the dry mass content of individual cell nuclei within spheroids. In its current implementation, PICS offers a versatile quantitative technique for continuous simultaneous monitoring of individual cellular components in biological applications where long-term label-free imaging is desirable.
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  • [1] Phase imaging with computational specificity (PICS) for measuring dry mass changes in sub-cellular compartments
    Kandel, Mikhail E.
    He, Yuchen R.
    Lee, Young Jae
    Chen, Taylor Hsuan-Yu
    Sullivan, Kathryn Michele
    Aydin, Onur
    Saif, M. Taher A.
    Kong, Hyunjoon
    Sobh, Nahil
    Popescu, Gabriel
    [J]. NATURE COMMUNICATIONS, 2020, 11 (01)
  • [2] Phase imaging with computational specificity (PICS)
    Popescu, Gabriel
    [J]. 2020 CONFERENCE ON LASERS AND ELECTRO-OPTICS (CLEO), 2020,
  • [3] Confirmation of sub-cellular resolution using oversampling imaging mass spectrometry
    Maimo-Barcelo, Albert
    Garate, Jone
    Bestard-Escalas, Joan
    Fernandez, Roberto
    Berthold, Luzie
    Lopez, Daniel H.
    Andres Fernandez, Jose
    Barcelo-Coblijn, Gwendolyn
    [J]. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2019, 411 (30) : 7935 - 7941
  • [4] Confirmation of sub-cellular resolution using oversampling imaging mass spectrometry
    Albert Maimó-Barceló
    Jone Garate
    Joan Bestard-Escalas
    Roberto Fernández
    Luzie Berthold
    Daniel H. Lopez
    José Andrés Fernández
    Gwendolyn Barceló-Coblijn
    [J]. Analytical and Bioanalytical Chemistry, 2019, 411 : 7935 - 7941
  • [5] White blood cell detection, classification and analysis using phase imaging with computational specificity (PICS)
    Michae J. Fanous
    Shenghua He
    Sourya Sengupta
    Krishnarao Tangella
    Nahil Sobh
    Mark A. Anastasio
    Gabriel Popescu
    [J]. Scientific Reports, 12
  • [6] White blood cell detection, classification and analysis using phase imaging with computational specificity (PICS)
    Fanous, Michae J.
    He, Shenghua
    Sengupta, Sourya
    Tangella, Krishnarao
    Sobh, Nahil
    Anastasio, Mark A.
    Popescu, Gabriel
    [J]. SCIENTIFIC REPORTS, 2022, 12 (01)
  • [7] Optical light scatter imaging of cellular and sub-cellular morphology changes in stressed rat hippocampal slices
    Johnson, LJ
    Hanley, DF
    Thakor, NV
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2000, 98 (01) : 21 - 31
  • [8] Complex optically computed phase microscopy for label-free sub-cellular imaging
    Liu, Xuan
    Liu, Yuwei
    Yu, Shupei
    Zhang, Yuanwei
    [J]. OPTICS CONTINUUM, 2023, 2 (04): : 793 - 800
  • [9] Label-free screening of brain tissue myelin content using phase imaging with computational specificity (PICS)
    Fanous, Michael
    Shi, Chuqiao
    Caputo, Megan P.
    Rund, Laurie A.
    Johnson, Rodney W.
    Das, Tapas
    Kuchan, Matthew J.
    Sobh, Nahil
    Popescu, Gabriel
    [J]. APL PHOTONICS, 2021, 6 (07)
  • [10] Changes in sub-cellular localisation of trophoblast and inner cell mass specific transcription factors during bovine preimplantation development
    Madeja, Zofia E.
    Sosnowski, Jaroslaw
    Hryniewicz, Kamila
    Warzych, Ewelina
    Pawlak, Piotr
    Rozwadowska, Natalia
    Plusa, Berenika
    Lechniak, Dorota
    [J]. BMC DEVELOPMENTAL BIOLOGY, 2013, 13