Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336T), a representative of the Roseobacter clade

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作者
Nora Buddruhs
Olga Chertkov
Jörn Petersen
Anne Fiebig
Amy Chen
Amrita Pati
Natalia Ivanova
Alla Lapidus
Lynne A. Goodwin
Patrick Chain
John C. Detter
Sabine Gronow
Nikos C. Kyrpides
Tanja Woyke
Markus Göker
Thorsten Brinkhoff
Hans-Peter Klenk
机构
[1] DSMZ - German Collection of Microorganisms and Cell Cultures,Leibniz
[2] Los Alamos National Laboratory,Institute
[3] Lawrence Berkeley National Laboratory,Bioscience Division
[4] DOE Joint Genome Institute,Biological Data Management and Technology Center
[5] St. Petersburg State University,Theodosius Dobzhansky Center for Genome Bioinformatics
[6] St. Petersburg Academic University,Algorithmic Biology Lab
[7] Institute for Chemistry and Biology of the Marine Environment (ICMB),undefined
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关键词
Methylotrophy e]methyl halides e]extrachromosomal elements e]; e]; e]; clade e]aerobe;
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摘要
Leisingera methylohalidivorans Schaefer et al. 2002 emend. Vandecandelaere et al. 2008 is the type species of the genus Leisingera. The genus belongs to the Roseobacter clade (Rhodobacteraceae, Alphaproteobacteria), a widely distributed lineage in marine environments. Leisingera and particularly L. methylohalidivorans strain MB2T is of special interest due to its methylotrophy. Here we describe the complete genome sequence and annotation of this bacterium together with previously unreported aspects of its phenotype. The 4,650,996 bp long genome with its 4,515 protein-coding and 81 RNA genes consists of three replicons, a single chromosome and two extrachromosomal elements with sizes of 221 kb and 285 kb.
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页码:128 / 141
页数:13
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