Comparison of three statistical approaches for feature selection for fine-scale genetic population assignment in four pig breeds

被引：0
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作者：
Ichrak Hayah
Mouna Ababou
Sara Botti
Bouabid Badaoui
机构：
[1] Mohammed V University in Rabat,Plant and Microbial Biotechnologies, Biodiversity, and Environment (BioBio)
[2] Genomic Center of Human Pathologies,Laboratory of Human Pathologies
[3] Mohammed V University in Rabat,PTP Science Park
[4] Via Einstein - Loc. Cascina Codazza,undefined
来源：
Tropical Animal Health and Production | 2021年 / 53卷
关键词：
Single-nucleotide polymorphism; Principal component analysis; Least absolute shrinkage and selection operator; Random forest; Boruta; Pig breeds;
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  • [1] Comparison of three statistical approaches for feature selection for fine-scale genetic population assignment in four pig breeds
    Hayah, Ichrak
    Ababou, Mouna
    Botti, Sara
    Badaoui, Bouabid
    [J]. TROPICAL ANIMAL HEALTH AND PRODUCTION, 2021, 53 (03)
  • [2] Applications of random forest feature selection for fine-scale genetic population assignment
    Sylvester, Emma V. A.
    Bentzen, Paul
    Bradbury, Ian R.
    Clement, Marie
    Pearce, Jon
    Horne, John
    Beiko, Robert G.
    [J]. EVOLUTIONARY APPLICATIONS, 2018, 11 (02): : 153 - 165
  • [3] Comparison of the fine-scale genetic structure of three dipterocarp species
    Takeuchi, Y
    Ichikawa, S
    Konuma, A
    Tomaru, N
    Niiyama, K
    Lee, SL
    Muhammad, N
    Tsumura, Y
    [J]. HEREDITY, 2004, 92 (04) : 323 - 328
  • [4] Comparison of the fine-scale genetic structure of three dipterocarp species
    Y Takeuchi
    S Ichikawa
    A Konuma
    N Tomaru
    K Niiyama
    S L Lee
    N Muhammad
    Y Tsumura
    [J]. Heredity, 2004, 92 : 323 - 328
  • [5] FINE-SCALE GENETIC STRUCTURE IN A WILD BIRD POPULATION: THE ROLE OF LIMITED DISPERSAL AND ENVIRONMENTALLY BASED SELECTION AS CAUSAL FACTORS
    Garroway, Colin J.
    Radersma, Reinder
    Sepil, Irem
    Santure, Anna W.
    De Cauwer, Isabelle
    Slate, Jon
    Sheldon, Ben C.
    [J]. EVOLUTION, 2013, 67 (12) : 3488 - 3500
  • [6] The fine-scale genetic structure & adaptive positive selection in the Lithuanian population from high-density SNP data
    Urnikyte, A.
    Flores Bello, A.
    Mondal, M.
    Molyte, A.
    Comas, D.
    Calafell, F.
    Bosch, E.
    Kucinskas, V.
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2020, 28 (SUPPL 1) : 726 - 726
  • [7] Applying new inter-individual approaches to assess fine-scale population genetic diversity in a neotropical frog, Eleutherodactylus ockendeni
    Elmer, K. R.
    Davila, J. A.
    Lougheed, S. C.
    [J]. HEREDITY, 2007, 99 (05) : 506 - 515
  • [8] Applying new inter-individual approaches to assess fine-scale population genetic diversity in a neotropical frog, Eleutherodactylus ockendeni
    K R Elmer
    J A Dávila
    S C Lougheed
    [J]. Heredity, 2007, 99 : 506 - 515
  • [9] Comparison of fine-scale genetic structure using nuclear microsatellites within two British oakwoods differing in population history
    Cottrell, JE
    Munro, RC
    Tabbener, HE
    Milner, AD
    Forrest, GI
    Lowe, AJ
    [J]. FOREST ECOLOGY AND MANAGEMENT, 2003, 176 (1-3) : 287 - 303
  • [10] RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)
    Benestan, Laura
    Gosselin, Thierry
    Perrier, Charles
    Sainte-Marie, Bernard
    Rochette, Remy
    Bernatchez, Louis
    [J]. MOLECULAR ECOLOGY, 2015, 24 (13) : 3299 - 3315
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