Composition of the oil-slime microbial community as determined by analysis of the 16S rRNA gene

被引:0
|
作者
T. V. Grigoryeva
A. V. Laikov
A. A. Rizvanov
O. N. Ilinskaya
R. P. Naumova
机构
[1] Kazan (Volga region) Federal University,
来源
Microbiology | 2013年 / 82卷
关键词
industrial oil-slime; bacterial community; 16S rRNA; T-RFLP;
D O I
暂无
中图分类号
学科分类号
摘要
Analysis of the 16S rRNA genes of the cultured microorganisms of industrial oil-slime revealed predominance (∼85–90%) of the Gammaproteobacteria in the community of aerobic heterotrophs and specific oil-slime degraders. Relation of the isolated strains with members of the genera Pseudomonas, Stenotrophomonas, and Enterobacter was established. Analysis of the same gene in the total DNA from the oil-slime revealed greater microbial diversity (∼20 operative taxonomic units determined by T-RFLP) than in the cultured part of the community, which included ∼12 different colony types. Three major restriction fragments were found, with their total area ∼50%. These results demonstrated the low morphological and phylogenetic diversity of the oil-slime bacterial community.
引用
收藏
页码:637 / 641
页数:4
相关论文
共 50 条
  • [1] Composition of the oil-slime microbial community as determined by analysis of the 16S rRNA gene
    Grigoryeva, T. V.
    Laikov, A. V.
    Rizvanov, A. A.
    Ilinskaya, O. N.
    Naumova, R. P.
    MICROBIOLOGY, 2013, 82 (05) : 637 - 641
  • [2] Microbial diversity in Chromobacterium violaceum determined by 16S rRNA gene analysis
    Bastos Silva, M. L. R.
    Pereira Lyra, M. C. C.
    Oliveira, J. Paula
    Burity, H. Almeida
    Campos-Takaki, G. M.
    CURRENT RESEARCH TOPICS IN APPLIED MICROBIOLOGY AND MICROBIAL BIOTECHNOLOGY, 2009, : 300 - +
  • [3] Diversity and composition of the bacterial community of Poyang Lake (China) as determined by 16S rRNA gene sequence analysis
    Wu, Lan
    Ge, Gang
    Zhu, Guofeng
    Gong, Shijie
    Li, Siguang
    Wan, Jinbao
    WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2012, 28 (01): : 233 - 244
  • [4] Diversity and composition of the bacterial community of Poyang Lake (China) as determined by 16S rRNA gene sequence analysis
    Lan Wu
    Gang Ge
    Guofeng Zhu
    Shijie Gong
    Siguang Li
    Jinbao Wan
    World Journal of Microbiology and Biotechnology, 2012, 28 : 233 - 244
  • [5] Computational analysis of microbial community using amplicon sequencing of 16S rRNA gene
    Singh, N.
    Singh, M. P.
    RESEARCH JOURNAL OF BIOTECHNOLOGY, 2022, 17 (05): : 143 - 150
  • [6] Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints
    Jürg B Logue
    Eva S Lindström
    The ISME Journal, 2010, 4 : 729 - 738
  • [7] Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints
    Logue, Jurg B.
    Lindstrom, Eva S.
    ISME JOURNAL, 2010, 4 (06): : 729 - 738
  • [8] Data on microbial community composition of sludge from high altitude wastewater treatment plants determined by 16S rRNA gene sequencing
    Chen, Chen
    Peng, Xiaochun
    Huang, Shan
    Wang, Yuannan
    Liao, Shumei
    Wei, Yang
    DATA IN BRIEF, 2019, 23
  • [9] Community analysis of picocyanobacteria in an oligotrophic lake by cloning 16S rRNA gene and 16S rRNA gene amplicon sequencing
    Fujimoto, Naoshi
    Mizuno, Keigo
    Yokoyama, Tomoki
    Ohnishi, Akihiro
    Suzuki, Masaharu
    Watanabe, Satoru
    Komatsu, Kenji
    Sakata, Yoichi
    Kishida, Naohiro
    Akiba, Michihiro
    Matsukura, Satoko
    JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 2015, 61 (05): : 171 - 176
  • [10] Microbial Community Composition and Diversity via 16S rRNA Gene Amplicons: Evaluating the Illumina Platform
    Sinclair, Lucas
    Osman, Omneya Ahmed
    Bertilsson, Stefan
    Eiler, Alexander
    PLOS ONE, 2015, 10 (02):