Pairwise and higher-order correlations among drug-resistance mutations in HIV-1 subtype B protease

被引:0
|
作者
Omar Haq
Ronald M Levy
Alexandre V Morozov
Michael Andrec
机构
[1] Rutgers,BioMaPS Institute for Quantitative Biology
[2] the State University of New Jersey,Department of Chemistry and Chemical Biology
[3] Rutgers,Department of Physics and Astronomy
[4] the State University of New Jersey,undefined
[5] Rutgers,undefined
[6] the State University of New Jersey,undefined
来源
关键词
Pair Correlation; Connected Information; Pair Level; Maximum Entropy Distribution; Accessory Position;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Pairwise and higher-order correlations among drug-resistance mutations in HIV-1 subtype B protease
    Haq, Omar
    Levy, Ronald M.
    Morozov, Alexandre V.
    Andrec, Michael
    BMC BIOINFORMATICS, 2009, 10
  • [2] HIV-1 protease and reverse-transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance
    Rhee, SY
    Fessel, WJ
    Zolopa, AR
    Hurley, L
    Liu, T
    Taylor, J
    Nguyen, DP
    Slome, S
    Klein, D
    Horberg, M
    Flamm, J
    Follansbee, S
    Schapiro, JM
    Shafer, RW
    JOURNAL OF INFECTIOUS DISEASES, 2005, 192 (03): : 456 - 465
  • [3] Cooperative Effects of Drug-Resistance Mutations in the Flap Region of HIV-1 Protease
    Foulkes-Murzycki, Jennifer E.
    Rosi, Christina
    Yilmaz, Nese Kurt
    Shafer, Robert W.
    Schiffer, Celia A.
    ACS CHEMICAL BIOLOGY, 2013, 8 (03) : 513 - 518
  • [4] DEVELOPMENT OF DRUG-RESISTANCE TO HIV-1 PROTEASE INHIBITORS
    RIDKY, T
    LEIS, J
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1995, 270 (50) : 29621 - 29623
  • [5] Temporal characterization of frequency of drug-resistance associated mutations in the HIV-1 protease and reverse transcriptase
    Ceccherini-Silberstein, F
    Santoro, M
    Svicher, V
    Gori, C
    Zaccarelli, M
    Forbici, F
    d'Arrigo, R
    Trotta, MP
    Bellocchi, MC
    Visco-Comandini, U
    Giannella, S
    Bertoli, A
    Antinori, A
    Perno, CF
    ANTIVIRAL THERAPY, 2004, 9 (04) : U84 - U84
  • [6] Drug resistance mutations in protease gene of HIV-1 subtype C infected patient population
    Misbah M.
    Gupta P.
    Roy G.
    Kumar S.
    Husain M.
    VirusDisease, 2021, 32 (3) : 480 - 491
  • [7] Drug Resistance Mutations for Surveillance of Transmitted HIV-1 Drug-Resistance: 2009 Update
    Bennett, Diane E.
    Camacho, Ricardo J.
    Otelea, Dan
    Kuritzkes, Daniel R.
    Fleury, Herve
    Kiuchi, Mark
    Heneine, Walid
    Kantor, Rami
    Jordan, Michael R.
    Schapiro, Jonathan M.
    Vandamme, Anne-Mieke
    Sandstrom, Paul
    Boucher, Charles A. B.
    van de Vijver, David
    Rhee, Soo-Yon
    Liu, Tommy F.
    Pillay, Deenan
    Shafer, Robert W.
    PLOS ONE, 2009, 4 (03):
  • [8] Diversity of HIV-1 Subtypes and Transmitted Drug-resistance Mutations Among Minority HIV-1 Variants in a Turkish Cohort
    Sarinoglu, Rabia Can
    Sili, Uluhan
    Hasdemir, Ufuk
    Aksu, Burak
    Soyletir, Guner
    Korten, Volkan
    CURRENT HIV RESEARCH, 2022, 20 (01) : 54 - 62
  • [9] Development and Evaluation of a National Reference Panel of HIV-1 Protease and Reverse Transcriptase Drug-Resistance Mutations for HIV-1 Genotypic Resistance Assays in China
    Sihong Xu
    Jingyun Li
    Zuoyi Bao
    Hui Xing
    Ping Zhong
    Hanping Li
    Haiwei Zhou
    Xinping Li
    Sharon Wu
    Aijing Song
    Xiuhua Li
    Jianhui Nie
    Youchun Wang
    Molecular Diagnosis & Therapy, 2010, 14 : 31 - 41
  • [10] Development and Evaluation of a National Reference Panel of HIV-1 Protease and Reverse Transcriptase Drug-Resistance Mutations for HIV-1 Genotypic Resistance Assays in China
    Xu, Sihong
    Li, Jingyun
    Bao, Zuoyi
    Xing, Hui
    Zhong, Ping
    Li, Hanping
    Zhou, Haiwei
    Li, Xinping
    Wu, Sharon
    Song, Aijing
    Li, Xiuhua
    Niel, Jianhui
    Wang, Youchun
    MOLECULAR DIAGNOSIS & THERAPY, 2010, 14 (01) : 31 - 41