Toward Ontology-Driven Omics Data Integration in Current Database Management Systems

被引：1
|
作者：
Springer, John [1 ]
Chen, Jake Y. [2 ,3 ,4 ]
机构：
[1] Purdue Univ, Coll Technol, Dept Comp & Informat Technol, W Lafayette, IN 47907 USA
[2] Indiana Univ, Personalize Med, Indianapolis, IN 46202 USA
[3] Purdue Univ, Personalize Med, Indianapolis, IN 46202 USA
[4] Indiana Univ Sch Informat, Indiana Ctr Syst Biol, Indianapolis, IN 46202 USA
来源：
2009 INTERNATIONAL CONFERENCE ON NETWORK-BASED INFORMATION SYSTEMS | 2009年
关键词：
D O I：
10.1109/NBiS.2009.80
中图分类号：
TP [自动化技术、计算机技术];
学科分类号：
0812 ;
摘要：
To fully realize the benefit of ontology-driven "Omics" data integration, it is essential that database management systems (DBMSs) provide persistent storage and efficient concurrent access in a manner that leverages the emerging Semantic Web technologies. In this paper, we explore the current capabilities of existing DBMSs, such as Oracle's database server, to meet the needs generated by the Semantic Web technologies. Our primary consideration is the new features provided by existing DBMSs to incorporate RDF, OWL, and SPARQL. We present a framework for this evaluation and lay the groundwork for subsequent benchmarking of the semantic-enabled DBMSs.
引用
收藏
页码：292 / +
页数：3
相关论文
共 50 条
  • [1] ODDI: Ontology-driven Data Integration
    Ceravolo, Paolo
    Cui, Zhan
    Damiani, Ernesto
    Gusmini, Alex
    Leida, Marcello
    [J]. KNOWLEDGE - BASED INTELLIGENT INFORMATION AND ENGINEERING SYSTEMS, PT 1, PROCEEDINGS, 2008, 5177 : 517 - +
  • [2] Ontology-driven integrative analysis of omics data through Onassis
    Eugenia Galeota
    Kamal Kishore
    Mattia Pelizzola
    [J]. Scientific Reports, 10
  • [3] Ontology-driven integrative analysis of omics data through Onassis
    Galeota, Eugenia
    Kishore, Kamal
    Pelizzola, Mattia
    [J]. SCIENTIFIC REPORTS, 2020, 10 (01)
  • [4] Research on ontology-driven product data management
    Hu, YJ
    Li, SP
    Yin, QW
    [J]. DCABES 2002, PROCEEDING, 2002, : 388 - 392
  • [5] Ontology-driven Heterogeneous Geographic Data Set Integration
    Wu, Meng-quan
    Wang, Zhou-long
    Zhang, An-ding
    Yang, Hua
    [J]. PROCEEDINGS OF THE 2009 WRI GLOBAL CONGRESS ON INTELLIGENT SYSTEMS, VOL IV, 2009, : 207 - 211
  • [6] Ontology-driven geographic information integration: A survey of current approaches
    Buccella, Agustina
    Cechich, Alejandra
    Fillottrani, Pablo
    [J]. COMPUTERS & GEOSCIENCES, 2009, 35 (04) : 710 - 723
  • [7] DISim: Ontology-driven Simulation of Biomedical Data Integration Tasks
    Sernadela, Pedro
    Pereira, Artur
    Rossetti, Rosaldo
    [J]. 2015 10TH IBERIAN CONFERENCE ON INFORMATION SYSTEMS AND TECHNOLOGIES (CISTI), 2015,
  • [8] Ontology-driven Data Integration for Railway Asset Monitoring Applications
    Tutcher, Jonathan
    [J]. 2014 IEEE INTERNATIONAL CONFERENCE ON BIG DATA (BIG DATA), 2014,
  • [9] Ontology-driven workflow management for biosequence processing systems
    Lemos, M
    Casanova, MA
    Seibel, LFB
    de Macedo, JAF
    de Miranda, AB
    [J]. DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS, 2004, 3180 : 781 - 790
  • [10] Ontology-Driven Relevance Reasoning Architecture for Data Integration Techniques
    Bilal, M.
    Khan, S.
    [J]. 2008 4TH INTERNATIONAL IEEE CONFERENCE INTELLIGENT SYSTEMS, VOLS 1 AND 2, 2008, : 834 - 839
12345