[1] Prince Charles Hosp, Thorac Med, Brisbane, Qld, Australia
[2] QIMR Berghofer Med Res Inst, Lung Bacteria, Brisbane, Qld, Australia
[3] Univ Queensland, Gallipoli Med Res Inst, Brisbane, Qld, Australia
[4] South Australian Hlth & Med Res Inst, Microbiome Res, Adelaide, SA, Australia
[5] Welcome Trust Sanger Inst, Cambridge, England
[6] Queens Univ Belfast, Sch Pharm, Belfast, Antrim, North Ireland
[7] Queensland Pathol, Queensland Mycobacterium Reference Lab, Brisbane, Qld, Australia
[8] Queensland Childrens Hosp, Resp Med, Brisbane, Qld, Australia
[9] Univ Queensland, Fac Med, Brisbane, Qld, Australia
[10] Univ Cambridge, Cambridge Med Res Inst, Cambridge, England