Phylogenetic study of Hypoxylon and related genera based on ribosomal ITS sequences

被引:72
|
作者
Sánchez-Ballesteros, J
González, V
Salazar, O
Acero, J
Portal, MA
Julián, M
Rubio, V
Bills, GF
Polishook, JD
Platas, G
Mochales, S
Peláez, F
机构
[1] Merck Sharp & Dohme Espana SA, Ctr Invest Basica, Nat Prod Drug Discovery, Madrid 28027, Spain
[2] Univ Autonoma Madrid, Dept Biotecnol Microbiana, Ctr Nacl Biotecnol, CSIC, E-28049 Madrid, Spain
[3] Natl Prod Drug Discovery, Rahway, NJ 07065 USA
关键词
Biscogniauxia; Camillea; molecular phylogeny; Nemania; rDNA sequencing; Whalleya; Xylariaceae;
D O I
10.2307/3761591
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Hypoxylon, with at least 130 currently accepted species and varieties, is one of the largest genera of the Xylariaceae. Taxonomic aspects that define and delimit the genus have varied among mycologists. To obtain insight in the phylogenetic relationships of Hypoxylon and its allies, the complete DNA sequences of the internal transcribed spacer region (including the 5.8S rRNA gene) from 41 isolates were determined, aligned and processed for phylogenetic reconstruction, and critically compared with the available taxonomic information. The results generally agree with the current concepts and limits established for the genus. The molecular approach supported the recent segregation of some allied genera (Biscogniauxia, Camillea, Whalleya, Creosphaeria, Nemania, and Kretzschmaria) from Hypoxylon. The species and varieties of Hypoxylon in the sense of modern authors appeared as a monophyletic group within the Xylariaceae. However the recent infrageneric division of Hypoxylon into sections Hypoxylon and Annulata was not supported by this limited molecular phylogenetic analysis. Likewise, this preliminary analysis did not reflect generic distinctions among species in genera with bipartite stromata (Camillea and Biscogniauxia). The importance of the anamorphs in the classification of this fungal group was evidenced by the correlation between the type of anamorph and the relative placement of the teleomorphs in the phylogenetic tree derived from sequence analysis.
引用
收藏
页码:964 / 977
页数:14
相关论文
共 50 条
  • [1] Phylogenetic relationships of Peronospora and related genera based on nuclear ribosomal ITS sequences
    Voglmayr, H
    [J]. MYCOLOGICAL RESEARCH, 2003, 107 : 1132 - 1142
  • [2] Phylogenetic classification of Antrodia and related genera based on ribosomal RNA internal transcribed spacer sequences
    Kim, SY
    Park, SY
    Jung, HS
    [J]. JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2001, 11 (03) : 475 - 481
  • [3] Phylogenetic relationships of Chaetomium and similar genera based on ribosomal DNA sequences
    Lee, S
    Hanlin, RT
    [J]. MYCOLOGIA, 1999, 91 (03) : 434 - 442
  • [4] A phylogenetic study of Perideridia (Apiaceae) based on nuclear ribosomal DNA ITS sequences
    Downie, SR
    Sun, FJ
    Katz-Downie, DS
    Colletti, GJ
    [J]. SYSTEMATIC BOTANY, 2004, 29 (03) : 737 - 751
  • [5] Phylogenetic Relationship of the Genus Gilbertella and Related Genera within the Order Mucorales Based on 5.8 S Ribosomal DNA Sequences
    T. Papp
    Klára Ács
    Ildikó Nyilasi
    Erzsébet Nagy
    Cs. Vágvölgyi
    [J]. Acta Biologica Hungarica, 2003, 54 : 393 - 402
  • [6] Phylogenetic relationship of the genus Gilbertella and related genera within the order mucorales based on 5.8 S ribosomal DNA sequences
    Papp, T
    Acs, K
    Nyilasi, I
    Nagy, E
    Vágvölgyi, C
    [J]. ACTA BIOLOGICA HUNGARICA, 2003, 54 (3-4): : 393 - 402
  • [7] Phylogenetic relationships of Elymus L. and related genera (Poaceae) based on the nuclear ribosomal internal transcribed spacer sequences
    Dizkirici, Ayten
    Kaya, Zeki
    Cabi, Evren
    Dogan, Musa
    [J]. TURKISH JOURNAL OF BOTANY, 2010, 34 (06) : 467 - 478
  • [8] PHYLOGENETIC RELATIONSHIPS IN TRICHILIA (MELIACEAE) BASED ON RIBOSOMAL ITS SEQUENCES
    Clarkson, James J.
    Pennington, Terence D.
    Chase, Mark W.
    Haynes, Gwilym
    Engstrand, Rachel
    Kaye, Maria
    Michalak, Ingo
    Muellner-Riehl, Alexandra
    [J]. PHYTOTAXA, 2016, 259 (01) : 6 - 17
  • [9] Phylogenetic relationships of Hapalopilus and related genera inferred from mitochondrial small subunit ribosomal DNA sequences
    Ko, KS
    Jung, HS
    Ryvarden, L
    [J]. MYCOLOGIA, 2001, 93 (02) : 270 - 276
  • [10] Phylogenetic analysis of the genera Pseudonocardia and Actinobispora based on 16S ribosomal DNA sequences
    Lee, SD
    Kim, ES
    Hah, YC
    [J]. FEMS MICROBIOLOGY LETTERS, 2000, 182 (01) : 125 - 129