Genetic diversity analysis among collected purslane (Portulaca oleracea L.) accessions using ISSR markers

被引:17
|
作者
Alam, M. Amirul [1 ]
Juraimi, Abdul Shukor [1 ]
Rafii, Mohd Yusop [1 ,2 ]
Hamid, Azizah Abdul [3 ]
Arolu, Ibrahim Wasiu [2 ]
Latif, M. Abdul [4 ]
机构
[1] Univ Putra Malaysia, Dept Crop Sci, Fac Agr, Upm Serdang 43400, Selangor De, Malaysia
[2] Univ Putra Malaysia, Inst Trop Agr, Upm Serdang 43400, Selangor De, Malaysia
[3] Univ Putra Malaysia, Fac Food Sci & Technol, Upm Serdang 43400, Selangor De, Malaysia
[4] Bangladesh Rice Res Inst, Gazipur, Bangladesh
关键词
Purslane (Portulaca oleracea L.); Genetic diversity; ISSR markers; Dendrogram; AMOVA; EST-SSR MARKERS; MOLECULAR MARKERS; PHYLOGENETIC RELATIONSHIP; POLYMORPHISM; CULTIVARS; RAPD; IDENTIFICATION; RESISTANT; GENOTYPES; SYSTEM;
D O I
10.1016/j.crvi.2014.10.007
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Genetic diversity and relationships among 45 collected purslane accessions were evaluated using ISSR markers. The 28 primers gave a total of 167 bands, among which 163 were polymorphic (97.6%). The genetic diversity as estimated by Shannon's information index was 0.513, revealing a quite high level of genetic diversity in the germplasm. The average number of observed allele, effective allele, expected heterozygosity, polymorphic information content (PIC) and Nei's index were 5.96, 1.59, 0.43, 0.35 and 0.35, respectively. The UPGMA dendrogram based on Nei's genetic distance grouped the whole germplasm into 7 distinct clusters. The analysis of molecular variance (AMOVA) revealed that 89% of total variation occurred within population, while 11% were found among populations. Based on the constructed dendrogram using ISSR markers those accessions that are far from each other by virtue of genetic origin and diversity index (like Ad l and Ac42; Ac19 and Ac45; Ac9 and Ac23; Ac18 and A25; Ac24 and Ac18) are strongly recommended to select as parent for future breeding program to develop high yielding and stress tolerant purslane variety in contribution to global food security. (C) 2014 Academie des sciences. Published by Elsevier Masson SAS. All rights reserved.
引用
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页码:1 / 11
页数:11
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