Asymptotology of chemical reaction networks

被引:42
|
作者
Gorban, A. N. [1 ]
Radulescu, O. [2 ]
Zinovyev, A. Y. [3 ]
机构
[1] Univ Leicester, Leicester LE1 7RH, Leics, England
[2] Univ Rennes 1, IRMAR, UMR 6625, F-35042 Rennes, France
[3] Mines ParisTech, Inst Curie, INSERM, U900, F-75248 Paris, France
关键词
Reaction network; Asymptotology; Dominant system; Limiting step; Multiscale asymptotic; Model reduction; MONOMOLECULAR REACTION SYSTEMS; LUMPING ANALYSIS; BALANCED TRUNCATION; MODEL-REDUCTION; KINETICS; ELUCIDATION; EQUILIBRIUM; MECHANISMS; PRINCIPLES; ENZYME;
D O I
10.1016/j.ces.2009.09.005
中图分类号
TQ [化学工业];
学科分类号
0817 ;
摘要
The concept of the limiting step is extended to the asymptotology of multiscale reaction networks. Complete theory for linear networks with well separated reaction rate constants is developed. We present algorithms for explicit approximations of eigenvalues and eigenvectors of kinetic matrix. Accuracy of estimates is proven. Performance of the algorithms is demonstrated on simple examples. Application of algorithms to nonlinear systems is discussed. (C) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码:2310 / 2324
页数:15
相关论文
共 50 条
  • [1] ASYMPTOTOLOGY
    BARANTSEV, RG
    [J]. VESTNIK LENINGRADSKOGO UNIVERSITETA SERIYA MATEMATIKA MEKHANIKA ASTRONOMIYA, 1976, (01): : 69 - 77
  • [2] Inference of chemical reaction networks
    Burnham, Samantha C.
    Searson, Dominic P.
    Willis, Mark J.
    Wright, Allen R.
    [J]. CHEMICAL ENGINEERING SCIENCE, 2008, 63 (04) : 862 - 873
  • [3] An antidote for chemical reaction networks
    Francesco Zamberlan
    [J]. Nature Catalysis, 2023, 6 : 1104 - 1104
  • [4] The Exploration of Chemical Reaction Networks
    Unsleber, Jan P.
    Reiher, Markus
    [J]. ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 71, 2020, 71 : 121 - 142
  • [5] Siphons in Chemical Reaction Networks
    Shiu, Anne
    Sturmfels, Bernd
    [J]. BULLETIN OF MATHEMATICAL BIOLOGY, 2010, 72 (06) : 1448 - 1463
  • [6] Concordant chemical reaction networks
    Shinar, Guy
    Feinberg, Martin
    [J]. MATHEMATICAL BIOSCIENCES, 2012, 240 (02) : 92 - 113
  • [7] CHEMICAL-REACTION NETWORKS
    OSTER, G
    PERELSON, A
    [J]. IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS, 1974, CA21 (06): : 709 - 721
  • [8] Identifiability of chemical reaction networks
    Gheorghe Craciun
    Casian Pantea
    [J]. Journal of Mathematical Chemistry, 2008, 44 : 244 - 259
  • [9] Monotone Chemical Reaction Networks
    Patrick De Leenheer
    David Angeli
    Eduardo D. Sontag
    [J]. Journal of Mathematical Chemistry, 2007, 41 : 295 - 314
  • [10] Programmability of Chemical Reaction Networks
    Cook, Matthew
    Soloveichik, David
    Winfree, Erik
    Bruck, Jehoshua
    [J]. ALGORITHMIC BIOPROCESSES, 2009, : 543 - +