Crystallographic analysis of TarI and TarJ, a cytidylyltransferase and reductase pair for CDP-ribitol synthesis in Staphylococcus aureus wall teichoic acid biogenesis

被引:1
|
作者
Li, Franco K. K. [1 ,2 ]
Gale, Robert T. [3 ]
Petrotchenko, Evgeniy V. [4 ]
Borchers, Christoph H. [4 ,5 ,6 ]
Brown, Eric D. [3 ]
Strynadka, Natalie C. J. [1 ,2 ]
机构
[1] Univ British Columbia, Dept Biochem & Mol Biol, Vancouver, BC V6T 1Z3, Canada
[2] Univ British Columbia, Ctr Blood Res, Vancouver, BC V6T 1Z3, Canada
[3] McMaster Univ, Dept Biochem & Biomed Sci, Michael G DeGroote Inst Infect Dis Res, Hamilton, ON L8N 3ZS, Canada
[4] McGill Univ, Lady Davis Inst, Jewish Gen Hosp, Segal Canc Prote Ctr, Montreal, PQ H3T 1E2, Canada
[5] Skolkovo Inst Sci & Technol, Ctr Computat & Data Intens Sci & Engn, Moscow 121205, Russia
[6] McGill Univ, Jewish Gen Hosp, Gerald Bronfman Dept Oncol, Montreal, PQ H3T 1E2, Canada
基金
加拿大创新基金会; 加拿大健康研究院; 加拿大自然科学与工程研究理事会;
关键词
Cell wall; Teichoic acid; Peptidoglycan; Gram-positive bacteria; Staphylococcus aureus; X-ray crystallography; ALCOHOL-DEHYDROGENASE; CYTIDYLYL TRANSFER; TERNARY COMPLEX; CROSS-LINKING; PEPTIDOGLYCAN; BIOSYNTHESIS; CYTIDYLTRANSFERASE; CRYSTALLIZATION; VISUALIZATION; INHIBITORS;
D O I
10.1016/j.jsb.2021.107733
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The cell wall of many pathogenic Gram-positive bacteria contains ribitol-phosphate wall teichoic acid (WTA), a polymer that is linked to virulence and regulation of essential physiological processes including cell division. CDP-ribitol, the activated precursor for ribitol-phosphate polymerization, is synthesized by a cytidylyltransferase and reductase pair known as TarI and TarJ, respectively. In this study, we present crystal structures of Staphylococcus aureus TarI and TarJ in their apo forms and in complex with substrates and products. The TarI structures illustrate the mechanism of CDP-ribitol synthesis from CTP and ribitol-phosphate and reveal structural changes required for substrate binding and catalysis. Insights into the upstream step of ribulose-phosphate reduction to ribitol-phosphate is provided by the structures of TarJ. Furthermore, we propose a general topology of the enzymes in a heterotetrameric form built using restraints from crosslinking mass spectrometry analysis. Together, our data present molecular details of CDP-ribitol production that may aid in the design of inhibitors against WTA biosynthesis.
引用
收藏
页数:13
相关论文
共 19 条
  • [1] Bifunctional catalysis by CDP-ribitol synthase:: Convergent recruitment of reductase and cytidylyltransferase activities in Haemophilus influenzae and Staphylococcus aureus
    Pereira, MP
    Brown, ED
    BIOCHEMISTRY, 2004, 43 (37) : 11802 - 11812
  • [2] Synthesis and Biological Activity of Tetrameric Ribitol Phosphate Fragments of Staphylococcus aureus Wall Teichoic Acid
    Jung, Yoon-Chul
    Lee, Jae-Hyeok
    Kim, Sang Ah
    Schmidt, Timo
    Lee, Wonchul
    Lee, Bok Luel
    Lee, Hee-Seung
    ORGANIC LETTERS, 2018, 20 (15) : 4449 - 4452
  • [3] Crystallographic analysis of Staphylococcus aureus LcpA, the primary wall teichoic acid ligase
    Li, Franco K. K.
    Rosell, Federico I.
    Gale, Robert T.
    Simorre, Jean-Pierre
    Brown, Eric D.
    Strynadka, Natalie C. J.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2020, 295 (09) : 2629 - 2639
  • [4] RIBITOL TEICHOIC ACID SYNTHESIS IN BACTERIOPHAGE-RESISTANT MUTANTS OF STAPHYLOCOCCUS-AUREUS-H
    SHAW, DRD
    MIRELMAN, D
    CHATTERJ.AN
    PARK, JT
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1970, 245 (19) : 5101 - &
  • [5] Genomic characterization of ribitol teichoic acid synthesis in Staphylococcus aureus:: genes, genomic organization and gene duplication
    Qian, ZL
    Yin, YB
    Zhang, Y
    Lu, LY
    Li, YX
    Jiang, Y
    BMC GENOMICS, 2006, 7 (1)
  • [6] Genomic characterization of ribitol teichoic acid synthesis in Staphylococcus aureus: genes, genomic organization and gene duplication
    Ziliang Qian
    Yanbin Yin
    Yong Zhang
    Lingyi Lu
    Yixue Li
    Ying Jiang
    BMC Genomics, 7
  • [7] (Automated) Synthesis of Well-defined Staphylococcus Aureus Wall Teichoic Acid Fragments
    Ali, Sara
    Hendriks, Astrid
    van Dalen, Rob
    Bruyning, Thomas
    Meeuwenoord, Nico
    Overkleeft, Herman S.
    Filippov, Dmitri, V
    van der Marel, Gijs A.
    van Sorge, Nina M.
    Codee, Jeroen D. C.
    CHEMISTRY-A EUROPEAN JOURNAL, 2021, 27 (40) : 10461 - 10469
  • [8] Synthesis and immunological study of a glycosylated wall teichoic acid-based vaccine against Staphylococcus aureus
    Shen, Peng
    Lin, Han
    Bao, Yikai
    Hong, Haofei
    Wu, Zhimeng
    CHINESE CHEMICAL LETTERS, 2023, 34 (04)
  • [9] Synthesis and immunological study of a glycosylated wall teichoic acid-based vaccine against Staphylococcus aureus
    Peng Shen
    Han Lin
    Yikai Bao
    Haofei Hong
    Zhimeng Wu
    Chinese Chemical Letters, 2023, 34 (04) : 225 - 229
  • [10] SYNTHESIS OF 4-O-BETA-D-GLUCOSAMINYL-D-RIBITOL AND 4-O-ALPHA-D-GLUCOSAMINYL-D-RIBITOL, DEGRADATION PRODUCTS OF RIBITOL TEICHOIC ACID FROM STAPHYLOCOCCUS AUREUS H
    HARDY, FE
    BADDILEY, J
    BUCHANAN, JG
    JOURNAL OF THE CHEMICAL SOCIETY, 1963, : 3360 - &