Pharmacogenomics of statin-related myopathy: Meta-analysis of rare variants from whole-exome sequencing

被引:16
|
作者
Floyd, James S. [1 ]
Bloch, Katarzyna M. [2 ]
Brody, Jennifer A. [1 ]
Maroteau, Cyrielle [3 ]
Siddiqui, Moneeza K. [3 ]
Gregory, Richard [4 ]
Carr, Daniel F. [1 ]
Molokhia, Mariam [5 ]
Liu, Xiaoming [6 ]
Bis, Joshua C. [1 ]
Ahmed, Ammar [7 ]
Liu, Xuan [4 ]
Hallberg, Par [8 ]
Yue, Qun-Ying [9 ]
Magnusson, Patrik K. E. [10 ]
Brisson, Diane [7 ,11 ,12 ]
Wiggins, Kerri L. [1 ]
Morrison, Alanna C. [13 ]
Khoury, Etienne [11 ,12 ]
McKeigue, Paul [14 ]
Stricker, Bruno H. [15 ]
Lapeyre-Mestre, Maryse [16 ]
Heckbert, Susan R. [17 ]
Gallagher, Arlene M. [8 ,18 ]
Chinoy, Hector [19 ]
Gibbs, Richard A. [20 ]
Bondon-Guitton, Emmanuelle [21 ]
Tracy, Russell [22 ,23 ]
Boerwinkle, Eric [13 ]
Gaudet, Daniel [11 ,12 ]
Conforti, Anita [24 ]
van Staa, Tjeerd [25 ]
Sitlani, Colleen M. [1 ]
Rice, Kenneth M. [26 ]
Maitland-van der Zee, Anke-Hilse [27 ]
Wadelius, Mia [7 ]
Morris, Andrew P. [28 ]
Pirmohamed, Munir [2 ]
Palmer, Colin A. N. [3 ]
Psaty, Bruce M. [1 ]
Alfirevic, Ana [2 ,5 ]
Palmer, Colin A. N. [3 ]
Baranova, Ekaterina V.
Eriksson, Niclas
Aaspollu, Anu
McCarthy, Alun
Delrieu, Olivier
机构
[1] Univ Washington, Dept Med, Seattle, WA 98195 USA
[2] Univ Liverpool, MRC Ctr Drug Safety Sci, Dept Mol & Clin Pharmacol, Liverpool, Merseyside, England
[3] Univ Dundee, Div Mol & Clin Med, Dundee, Scotland
[4] Univ Liverpool, Inst Integrat Biol, Funct & Comparat Genom, Liverpool, Merseyside, England
[5] Sch Populat Hlth & Environm Sci, London, England
[6] Univ Texas Hlth Sci Ctr Houston, Ctr Human Genet, Houston, TX 77030 USA
[7] Univ Liverpool, Sch Med, Liverpool, Merseyside, England
[8] Uppsala Univ, Univ Uppsala Hosp, Dept Med Sci, Clin Pharmacol & Sci Life Lab, Uppsala, Sweden
[9] Med Prod Agcy, Uppsala, Sweden
[10] Karolinska Inst, Dept Med Epidemiol & Biostat, Swedish Twin Registry, Stockholm, Sweden
[11] Univ Montreal, Community Gene Med Ctr, Clin Lipidol & Rare Lipid Disorders Unit, Dept Med,Lipid Clin,Chicoutimi Hosp, Chicoutimi, PQ, Canada
[12] ECOGENE 21 Clin & Translat Res Ctr, Chicoutimi, PQ, Canada
[13] Univ Texas Hlth Sci Ctr Houston, Sch Publ Hlth, Ctr Human Genet, Dept Epidemiol Human Genet & Environm Sci, Houston, TX 77030 USA
[14] Univ Edinburgh, Sch Med, Usher Inst Populat Hlth Sci & Informat, Edinburgh, Midlothian, Scotland
[15] Erasmus MC, Dept Epidemiol, Rotterdam, Netherlands
[16] Paul Sabatier Univ Toulouse III, UPS Toulouse, Lab Pharmacol Med & Clin, Toulouse, France
[17] Univ Washington, Dept Epidemiol, Seattle, WA 98195 USA
[18] Clin Practice Res Datalink CPRD Med & Healthcare, London, England
[19] Salford Royal NHS Fdn Trust, Manchester Acad Hlth Sci Ctr, Dept Rheumatol, Salford, Lancs, England
[20] Baylor Coll Med, Human Genome Sequencing Ctr, Houston, TX 77030 USA
[21] CHU Toulouse, Ctr Pharmacovigilance, Toulouse, France
[22] Univ Vermont, Larner Coll Med, Dept Pathol & Lab Med, Burlington, VT USA
[23] Univ Vermont, Dept Biochem, Larner Coll Med, Burlington, VT 05405 USA
[24] Policlin Gb Rossi, UO Farmacol, Verona, Italy
[25] Univ Manchester, Div Informat Imaging & Data Sci, Manchester, Lancs, England
[26] Univ Washington, Dept Biostat, Seattle, WA 98195 USA
[27] AMC, Resp Med Pediat Resp Med, Amsterdam, Netherlands
[28] Univ Liverpool, Dept Biostat, Liverpool, Merseyside, England
来源
PLOS ONE | 2019年 / 14卷 / 06期
基金
英国医学研究理事会; 瑞典研究理事会; 英国经济与社会研究理事会; 英国惠康基金; 英国工程与自然科学研究理事会;
关键词
GENETIC VARIANT;
D O I
10.1371/journal.pone.0218115
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Aims Statin-related myopathy (SRM), which includes rhabdomyolysis, is an uncommon but important adverse drug reaction because the number of people prescribed statins worldwide is large. Previous association studies of common genetic variants have had limited success in identifying a genetic basis for this adverse drug reaction. We conducted a multi-site whole-exome sequencing study to investigate whether rare coding variants confer an increased risk of SRM. Methods and results SRM 3-5 cases (N = 505) and statin treatment-tolerant controls (N = 2047) were recruited from multiple sites in North America and Europe. SRM 3-5 was defined as symptoms consistent with muscle injury and an elevated creatine phosphokinase level >4 times upper limit of normal without another likely cause of muscle injury. Whole-exome sequencing and variant calling was coordinated from two analysis centres, and results of single-variant and gene-based burden tests were meta-analysed. No genome-wide significant associations were identified. Given the large number of cases, we had 80% power to identify a variant with minor allele frequency of 0.01 that increases the risk of SRM 6-fold at genome-wide significance. Conclusions In this large whole-exome sequencing study of severe statin-related muscle injury conducted to date, we did not find evidence that rare coding variants are responsible for this adverse drug reaction. Larger sample sizes would be required to identify rare variants with small effects, but it is unclear whether such findings would be clinically actionable.
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页数:13
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