DNA sequencing by hybridization;
sequence assembling;
genome mapping;
sequence alignment;
D O I:
10.1016/j.ejor.2003.10.054
中图分类号:
C93 [管理学];
学科分类号:
12 ;
1201 ;
1202 ;
120202 ;
摘要:
Recently we observe a great breakthrough in biology connected with the studies on genomes. These achievements would be impossible without an input from other sciences, combinatorial optimization being one of them. This study is devoted to a presentation of the most important (to our opinion) area of the computational biology, mostly connected with DNA studies, where combinatorial optimization impact was clearly visible. They include: sequencing DNA chains, assembling them, genome mapping and sequence comparison. (C) 2004 Elsevier B.V. All rights reserved.
机构:
Univ Arizona, Dept Elect & Comp Engn, Tucson, AZ 85721 USA
Univ Arizona, Dept Phys, Tucson, AZ 85721 USAUniv Arizona, Dept Elect & Comp Engn, Tucson, AZ 85721 USA
Zhang, Bingzhi
Sone, Akira
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机构:
Aliro Technol Inc, Boston, MA 02135 USAUniv Arizona, Dept Elect & Comp Engn, Tucson, AZ 85721 USA
Sone, Akira
Zhuang, Quntao
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h-index: 0
机构:
Univ Arizona, Dept Elect & Comp Engn, Tucson, AZ 85721 USA
Univ Arizona, James C Wyant Coll Opt Sci, Tucson, AZ 85721 USAUniv Arizona, Dept Elect & Comp Engn, Tucson, AZ 85721 USA
机构:
Univ Calif San Diego, Elect & Comp Engn Dept, La Jolla, CA 92093 USAUniv Calif San Diego, Elect & Comp Engn Dept, La Jolla, CA 92093 USA
Bhardwaj, Vinnu
Pevzner, Pavel A.
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机构:
Univ Calif San Diego, Comp Sci & Engn Dept, La Jolla, CA 92093 USAUniv Calif San Diego, Elect & Comp Engn Dept, La Jolla, CA 92093 USA
Pevzner, Pavel A.
Rashtchian, Cyrus
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Comp Sci & Engn Dept, La Jolla, CA 92093 USA
Univ Calif San Diego, Qualcomm Inst, La Jolla, CA 92093 USAUniv Calif San Diego, Elect & Comp Engn Dept, La Jolla, CA 92093 USA
Rashtchian, Cyrus
Safonova, Yana
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h-index: 0
机构:
Univ Calif San Diego, Comp Sci & Engn Dept, La Jolla, CA 92093 USAUniv Calif San Diego, Elect & Comp Engn Dept, La Jolla, CA 92093 USA