Towards synthetic molecular motors: a model elastic-network study

被引:8
|
作者
Sarkar, Amartya [1 ]
Flechsig, Holger [1 ,2 ,3 ]
Mikhailov, Alexander S. [1 ,2 ,3 ]
机构
[1] Max Planck Gesell, Fritz Haber Inst, Dept Phys Chem, Faradayweg 4-6, D-14195 Berlin, Germany
[2] Hiroshima Univ, Grad Sch Sci, Res Ctr Math Chromatin Live Dynam RcMcD, 1-3-1 Kagamiyama, Hiroshima 7398526, Japan
[3] Hiroshima Univ, Grad Sch Sci, Dept Math & Life Sci, 1-3-1 Kagamiyama, Hiroshima 7398526, Japan
来源
NEW JOURNAL OF PHYSICS | 2016年 / 18卷
关键词
molecular motor; elastic network; stochastic model; Brownian ratchet; power stroke; unidirectional transport; synthetic motor; VIRUS NS3 HELICASE; MYOSIN-V; SINGLE-PARAMETER; PROTEIN MOTIONS; BROWNIAN MOTORS; DYNAMICS; KINESIN; FLUCTUATIONS; MICROSCOPY; F-1-ATPASE;
D O I
10.1088/1367-2630/18/4/043006
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Protein molecular motors play a fundamental role in biological cells and development of their synthetic counterparts is a major challenge. Here, we show how a model motor system with the operation mechanism resembling that of muscle myosin can be designed at the concept level, without addressing the implementation aspects. The model is constructed as an elastic network, similar to the coarse-grained descriptions used for real proteins. We show by numerical simulations that the designed synthetic motor can operate as a deterministic or Brownian ratchet and that there is a continuous transition between such two regimes. The motor operation under external load, approaching the stall condition, is also analysed.
引用
收藏
页数:15
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