Paenibacillus sabuli sp. nov., isolated from the South China Sea

被引:2
|
作者
Gao, Qi-Jie [1 ,2 ,3 ]
Mo, Kun-Lian [2 ,3 ]
Hu, Yong-Hua [2 ,3 ,4 ]
Liu, Zhi-Yuan [1 ]
Huang, Hui-Qin [2 ,3 ]
机构
[1] Hainan Univ, Coll Marine Sci, Haikou 570228, Hainan, Peoples R China
[2] Hainan Acad Trop Agr Resource, Inst Trop Biosci & Biotechnol, CATAS, Haikou 571101, Hainan, Peoples R China
[3] Hainan Prov Key Lab Funct Components Res & Utiliz, Haikou 571101, Hainan, Peoples R China
[4] Pilot Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266071, Peoples R China
关键词
coastal sand; Paenibacillus sabuli sp. nov; polyphasic taxonomy; 16S rRNA gene; DNA; TAXONOMY; GENES;
D O I
10.1099/ijsem.0.005568
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-positive, rod-shaped, motile, spore-forming bacterium, designated strain IB182496T, was isolated from coastal sand of the South China Sea. The strain grew optimally at pH 7.0-9.0, 20-30 degrees C, and with NaCl 3.0-5.0 %. The predominant menaquinone was MK-7 and the major cellular fatty acids were anteiso-C 15:0, iso-C 16: 0 and C 16:0. The polar lipids in the cell wall included diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, three unidentified phospholipids and one unidentified lipid. The comparison of 16S rRNA gene sequences indicated that strain IB182496T was most closely related to `Paenibacillus sambharensis' SMB1 and Paenibacillus tarimensis SA-7-6T with similarities of 95.7 and 95.5 %, respectively. The whole-genome average nucleotide identity values between strain IB182496T and the two reference strains were 70.8 and 70.5%, and the digital DNA-DNA hybridization values were 18.7 and 18.0 %, respectively. Genomic analyses showed that strain IB182496T presented a genome of 6.22 Mbp with chromosomal G+C content of 60.3 %, and a total of 5261 genes were predicted. The combined phylogenetic relatedness, phenotypic and genotypic features supported the conclusion that strain IB182496T should be considered as representing a novel species of the genus Paenibacillus, for which we propose the name Paenibacillus sabuli sp. nov. with the type strain IB182496T (=MCCC 1K04627T=JCM 34216T).
引用
收藏
页数:7
相关论文
共 50 条
  • [1] Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis thaliana phyllosphere
    Qi, Shan Shan
    Cnockaert, Margo
    Carlier, Aurelien
    Vandamme, Peter A.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (04)
  • [2] Paenibacillus agilis sp. nov., Paenibacillus cremeus sp. nov. and Paenibacillus terricola sp. nov., isolated from rhizosphere soils
    Kim, Jiyoun
    Chhetri, Geeta
    Kim, Inhyup
    So, Yoonseop
    Seo, Taegun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (12)
  • [3] Paenibacillus silvisoli sp. nov. and Paenibacillus humicola sp. nov., isolated from forest soil
    Lee, Hyosun
    Chaudhary, Dhiraj Kumar
    Lim, Oung Bin
    Kim, Dong-Uk
    ARCHIVES OF MICROBIOLOGY, 2024, 206 (01)
  • [4] Paenibacillus silvisoli sp. nov. and Paenibacillus humicola sp. nov., isolated from forest soil
    Hyosun Lee
    Dhiraj Kumar Chaudhary
    Oung Bin Lim
    Dong-Uk Kim
    Archives of Microbiology, 2024, 206
  • [5] Bacillusabyssalis sp. nov., isolated from a sediment of the South China Sea
    Zhi-Qing You
    Jie Li
    Sheng Qin
    Xin-Peng Tian
    Fa-Zuo Wang
    Si Zhang
    Wen-Jun Li
    Antonie van Leeuwenhoek, 2013, 103 : 963 - 969
  • [6] Paracoccus beibuensis sp. nov., Isolated from the South China Sea
    Qiang Zheng
    Yanan Wang
    Chuang Chen
    Yu Wang
    Xiaomin Xia
    Yingnan Fu
    Rui Zhang
    Nianzhi Jiao
    Current Microbiology, 2011, 62 : 710 - 714
  • [7] Gracilibacillusmarinus sp. nov., isolated from the northern South China Sea
    Hui-qin Huang
    Ying Wang
    Wei-dao Yuan
    Chuan Xiao
    Jian-jun Ye
    Min Liu
    Jun Zhu
    Qian-guang Sun
    Shi-xiang Bao
    Antonie van Leeuwenhoek, 2013, 104 : 695 - 701
  • [8] Paenibacillus auburnensis sp. nov. and Paenibacillus pseudetheri sp. nov., isolated from the rhizosphere of Zea mays
    Kaempfer, Peter
    Lipski, Andre
    McInroy, John A.
    Clermont, Dominique
    Lamothe, Lucie
    Glaeser, Stefanie P.
    Criscuolo, Alexis
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (04)
  • [9] Description of Paenibacillus antri sp. nov. and Paenibacillus mesophilus sp. nov., isolated from cave soil
    Rao, Manik Prabhu Narsing
    Dong, Zhou-Yan
    Kan, Yu
    Zhang, Kun
    Fang, Bao-Zhu
    Xiao, Min
    Kang, Ying-Qian
    Li, Wen-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (02) : 1048 - 1054
  • [10] Paenibacillus lycopersici sp. nov. and Paenibacillus rhizovicinus sp. nov., isolated from the rhizosphere of tomato (Solanum lycopersicum)
    Shin Ae Lee
    Tae-Wan Kim
    Jun Heo
    Mee-Kyung Sang
    Jaekyeong Song
    Soon-Wo Kwon
    Hang-Yeon Weon
    Journal of Microbiology, 2020, 58 : 832 - 840