Phenobook: an open source software for phenotypic data collection

被引:10
|
作者
Crescente, Juan M. [1 ,2 ]
Guidobaldi, Fabio [1 ,2 ]
Demichelis, Melina [1 ]
Formica, Maria B. [1 ]
Helguera, Marcelo [1 ]
Vanzetti, Leonardo S. [1 ,2 ]
机构
[1] EEA INTA Marcos Juarez, Grp Biotecnol & Recursos Genet, Ruta 12 Km 3, RA-2580 Marcos Juarez, Argentina
[2] Consejo Nacl Invest Cient & Tecn, Buenos Aires, DF, Argentina
来源
GIGASCIENCE | 2017年 / 6卷 / 04期
关键词
big data; database; data collection; FIELD BOOK; GENE;
D O I
10.1093/gigascience/giw019
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different places, times, and ways, adding different levels of complexity and error in data collecting. Furthermore, data processing can be time consuming, and input errors may produce unwanted results. Results: We have developed a novel, open source software called Phenobook, an easy, flexible, and intuitive tool to organize, collect, and save experimental data for further analyses. Phenobook was conceived to collect phenotypic observations in a user-friendly, cost-effective way. It consists of a web-based software for experiment design, data input and visualization, and exportation, combined with a mobile application for remote data collecting. We provide in this article a detailed description of the developed tool. Conclusion: Phenobook is a software tool that can be easily implemented in collaborative research and development projects involving data collecting and forward analyses. Adopting Phenobook is expected to improve the involved processes by minimizing input errors, resulting in higher quality and reliability of the research outcomes.
引用
收藏
页码:1 / 5
页数:5
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