Molecular characterization of Botrytis ourmia-like virus, a mycovirus close to the plant pathogenic genus Ourmiavirus

被引:48
|
作者
Donaire, Livia [1 ,2 ]
Rozas, Julio [3 ,4 ]
Ayllon, Maria A. [1 ,2 ]
机构
[1] Univ Politecn Madrid, Ctr Biotecnol Genom Plantes UPM INIA, Campus Montegancedo, Madrid 28223, Spain
[2] Univ Politecn Madrid, ETSI Agron, Campus Montegancedo, Madrid 28223, Spain
[3] Univ Barcelona, Dept Genet, Barcelona, Spain
[4] Univ Barcelona, Inst Recerca Biodiversitat IRBio, Barcelona, Spain
关键词
Botrytis; Ourmiavirus; Narnaviridae; Mycovirus; Evolution; MULTIPLE SEQUENCE ALIGNMENT; ROD-SHAPED MYCOVIRUS; GENOME CHARACTERIZATION; FAMILY NARNAVIRIDAE; HYPOVIRULENCE; FUNGUS;
D O I
10.1016/j.virol.2015.11.027
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The molecular characterization of a novel single-stranded RNA virus, obtained by next generation sequencing using Illumina platform, in a field grapevine isolate of the plant pathogenic fungus Botrytis, is reported in this work. The sequence comparison of this virus against the NCBI database showed a strong identity with RNA dependent RNA polymerases (RdRps) of plant pathogenic viruses belonging to the genus Ourmiavirus, therefore, this novel virus was named Botrytis ourmia-like virus (BOLV). BOLV has one open reading frame of 2169 nucleotides, which encodes a protein of 722 amino acids showing conserved domains of plant RNA viruses RdRps such as the most conserved GDD active domain. Our analyses showed that BOLV is phylogenetically closer to the fungal Narnavirus and the plant Ourmiavirus than to Mitovirus of the family Narnaviridae. Hence, we proposed that BOLV might represent the link between fungal viruses of the family Narnaviridae and the plant ourmiaviruses. (C) 2015 Elsevier Inc. All rights reserved.
引用
收藏
页码:158 / 164
页数:7
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