The complete chloroplast genome of Euonymus alatus (Celastraceae)

被引:0
|
作者
Ning, Kun [1 ]
Zhou, Ting [2 ]
Wang, Yaolong [1 ]
El-Kassaby, Yousry A. [3 ]
Ma, Yan [1 ]
机构
[1] Jinling Inst Technol, Coll Hort, Nanjing, Jiangsu, Peoples R China
[2] Jiangsu Prov & Chinese Acad Sci, Inst Bot, Nanjing Bot Garden Mem Sun Yat Sen, Nanjing, Peoples R China
[3] Univ British Columbia, Fac Forestry, Dept Forest & Conservat Sci, Vancouver, BC, Canada
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 04期
关键词
Euonymus alatus; chloroplast genome; phylogeny;
D O I
10.1080/23802359.2022.2067494
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Euonymus alatus, Celastraceae, is a deciduous tree species valued for its ornamental and medicinal properties. Here, the species' whole chloroplast genome sequence was generated by assembling the Illumina paired-end sequencing reads. The circular genome was 157,611 bp in length, exhibiting a typical quadripartite structure with a large single-copy (LSC: 85,892 bp), a small single-copy (SSC: 18,419 bp), and a pair of inverted repeat regions (IRA and IRB: each of 26,650 bp). The chloroplast genome encoded 131 genes, including 87 protein-coding (78 protein-coding gene species), 36 transfer RNA (29 tRNA species), and 8 ribosomal RNA genes (4 rRNA species). The overall GC content was 37.3%, while the corresponding values of the LSC, SSC and IR regions were 35.1, 31.7 and 42.7%, respectively. Phylogenetic analysis of 12 species complete chloroplast genomes suggested that E. alatus was relatively close to E. japonicus. This complete chloroplast genome is expected to provide valuable insight into further phylogenetic reconstruction of the Celastraceae species.
引用
收藏
页码:707 / 708
页数:2
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