Microsatellite Stock Identification of Chum Salmon on a Pacific Rim Basis

被引:18
|
作者
Beacham, Terry D. [1 ]
Candy, John R. [1 ]
Wallace, C. [1 ]
Urawa, Shigehiko [2 ]
Sato, Shunpei [2 ]
Varnavskaya, Natalia V. [3 ]
Le, Khai D. [1 ]
Wetklo, Michael [1 ]
机构
[1] Fisheries & Oceans Canada, Pacific Biol Stn, Nanaimo, BC V9T 6N7, Canada
[2] Natl Salmon Resources Ctr, Fisheries Res Agcy, Toyohira Ku, Sapporo, Hokkaido 0620922, Japan
[3] Kamchatka Fishery & Oceanog Res Inst, Petropavlovsk Kamchatski 683000, Russia
关键词
CROSS-SPECIES AMPLIFICATION; ONCORHYNCHUS-KETA WALBAUM; POPULATION-STRUCTURE; CHINOOK SALMON; INDIVIDUAL IDENTIFICATION; GENETIC-VARIATION; WESTERN ALASKA; LOCI; RIVER; TETRANUCLEOTIDE;
D O I
10.1577/M08-188.1
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
The variation at 14 microsatellite loci was analyzed for more than 53,000 chum salmon Oncorhynchus keta from 381 locations ranging from Korea to Washington State and used to estimate the stock composition of mixed-stock fishery samples. High resolution of the samples was possible, the number of reporting groups being distributed as follows: Korea = 1, Japan = 7, Russia = 8, Alaska = 15, Canadian Yukon River = 5, British Columbia = 16, and Washington State = 5. The number of alleles observed at a locus was related to the power of the locus in providing accurate estimates of the stock composition of single population mixtures. Approximately 800 alleles were observed across the 14 microsatellites, providing the basis for high-resolution stock identification. Analysis of known-origin samples indicated that accurate regional estimates of stock composition were obtained. The estimated stock compositions of mixed-fishery samples from coastal Japan, the Sea of Okhotsk, the western Pacific Ocean, the Gulf of Alaska, and coastal British Columbia were quite different among samples and clearly reflected the presence of local populations. Microsatellites have provided the ability to obtain accurate estimates of the stock composition of chum salmon from many locations in the Pacific Rim.
引用
收藏
页码:1757 / 1776
页数:20
相关论文
共 50 条
  • [1] Estimation of stock composition and individual identification of sockeye salmon on a Pacific Rim basis using microsatellite and major histocompatibility complex variation
    Beacham, TD
    Candy, JR
    McIntosh, B
    MacConnachie, C
    Tabata, A
    Kaukinen, K
    Deng, LT
    Miller, KM
    Withler, RE
    Varnavskaya, N
    [J]. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY, 2005, 134 (05) : 1124 - 1146
  • [2] Estimation of stock composition and individual identification of Chinook salmon across the Pacific Rim by use of microsatellite variation
    Beacham, Terry D.
    Candy, John R.
    Jonsen, Kimberly L.
    Supernault, Janine
    Wetklo, Michael
    Deng, Langtuo
    Miller, Kristina M.
    Withler, Ruth E.
    Varnavskaya, Natalia
    [J]. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY, 2006, 135 (04) : 861 - 888
  • [3] Genetic stock identification of overwintering chum salmon in the North Pacific Ocean
    McCraney, W. Tyler
    Farley, Edward V.
    Kondzela, Christine M.
    Naydenko, Svetlana V.
    Starovoytov, Alexander N.
    Guyon, Jeffrey R.
    [J]. ENVIRONMENTAL BIOLOGY OF FISHES, 2012, 94 (04) : 663 - 668
  • [4] Genetic stock identification of overwintering chum salmon in the North Pacific Ocean
    W. Tyler McCraney
    Edward V. Farley
    Christine M. Kondzela
    Svetlana V. Naydenko
    Alexander N. Starovoytov
    Jeffrey R. Guyon
    [J]. Environmental Biology of Fishes, 2012, 94 : 663 - 668
  • [5] Population structure of chum salmon (Oncorhynchus keta) across the Pacific Rim, determined from microsatellite analysis
    Beacham, Terry D.
    Candy, John R.
    Le, Khai D.
    Wetklo, Michael
    [J]. FISHERY BULLETIN, 2009, 107 (02): : 244 - 260
  • [6] Genetic variation and population structure of chum salmon in the North Pacific rim inferred from mitochondrial and microsatellite DNA analyses
    Abe, S.
    Yoon, M.
    Sato, S.
    Moriya, S.
    Urawa, S.
    Urano, A.
    [J]. AQUACULTURE, 2007, 272 : S239 - S239
  • [7] Population structure and stock identification of chum salmon Oncorhynchus keta from Japan determined by microsatellite DNA variation
    Terry D Beacham
    Shunpei Sato
    Shigehiko Urawa
    Khai D Le
    Michael Wetklo
    [J]. Fisheries Science, 2008, 74 : 983 - 994
  • [8] Population structure and stock identification of chum salmon Oncorhynchus keta from Japan determined by microsatellite DNA variation
    Beacham, Terry D.
    Sato, Shunpei
    Urawa, Shigehiko
    Le, Khai D.
    Wetklo, Michael
    [J]. FISHERIES SCIENCE, 2008, 74 (05) : 983 - 994
  • [9] Development of molecular markers for genetic stock identification of chum salmon
    Abe, Syuiti
    Sato, Shunpei
    Kojima, Hiroyuki
    Ando, Junko
    Ando, Hironori
    Wilmot, Richard L.
    Seeb, Lisa W.
    Efremov, Vradimir
    Leclair, Larry
    Buchholtz, Wally
    Deuk-Hee, Jin
    Kaeriyama, Masahide
    Urawa, Shigehiko
    Urano, Akihisa
    [J]. FISHERIES SCIENCE, 2002, 68 : 353 - 356
  • [10] A new, standardized international Pacific Rim baseline for genetic stock identification (GSI) of Chinook Salmon
    Van Doornik, Donald M.
    Moran, Paul
    Rondeau, Eric B.
    Nichols, Krista M.
    Narum, Shawn R.
    Campbell, Matthew R.
    Clemento, Anthony J.
    Hargrove, John S.
    Hess, Jon E.
    Horn, Rebekah L.
    Seeb, Lisa W.
    Stephenson, Jeff J.
    McKinney, Garrett J.
    [J]. NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT, 2024, 44 (04) : 857 - 869