Phylogeography, mitochondrial DNA diversity, and demographic history of geladas (Theropithecus gelada)

被引:25
|
作者
Zinner, Dietmar [1 ]
Atickem, Anagaw [1 ,2 ]
Beehner, Jacinta C. [3 ,4 ]
Bekele, Afework [5 ]
Bergman, Thore J. [3 ,6 ]
Burke, Ryan [7 ]
Dolotovskaya, Sofya [2 ]
Fashing, Peter J. [8 ]
Gippoliti, Spartaco [9 ]
Knauf, Sascha [10 ]
Knauf, Yvonne [10 ,11 ]
Mekonnen, Addisu [5 ,12 ]
Moges, Amera [13 ]
Nguyen, Nga [8 ]
Stenseth, Nils Chr [5 ,12 ]
Roos, Christian [2 ,14 ]
机构
[1] Leibniz Inst Primate Res, German Primate Ctr DPZ, Cognit Ethol Lab, Kellnerweg 4, Gottingen, Germany
[2] Leibniz Inst Primate Res, German Primate Ctr DPZ, Primate Genet Lab, Kellnerweg 4, Gottingen, Germany
[3] Univ Michigan, Dept Psychol, Ann Arbor, MI USA
[4] Univ Michigan, Dept Anthropol, Ann Arbor, MI 48109 USA
[5] Addis Ababa Univ, Coll Nat Sci, Dept Zool Sci, Addis Ababa, Ethiopia
[6] Univ Michigan, Dept Ecol & Evolutionary Biol, Ann Arbor, MI 48109 USA
[7] Univ Oxford, Dept Zool, Long Term Ecol Lab, Oxford, England
[8] Calif State Univ Fullerton, Dept Anthropol & Environm Studies Program, Fullerton, CA 92634 USA
[9] Soc Italiana Storia Fauna G Altobello, Viale Liegi 48A, Rome, Italy
[10] Leibniz Inst Primate Res, German Primate Ctr, Infect Biol Unit, Work Grp Neglected Trop Dis, Kellnerweg 4, Gottingen, Germany
[11] Univ Gottingen, Dept Anim Sci, Burckhardtweg 2, Gottingen, Germany
[12] Univ Oslo, CEES, Dept Biosci, Oslo, Norway
[13] Bahir Dar Univ, Coll Nat Sci, Dept Biol, Bahir Dar, Ethiopia
[14] Leibniz Inst Primate Res, German Primate Ctr DPZ, Gene Bank Primates, Kellnerweg 4, Gottingen, Germany
来源
PLOS ONE | 2018年 / 13卷 / 08期
关键词
POPULATION GENETIC-STRUCTURE; RIFT-VALLEY; BABOONS; CERCOPITHECIDAE; NEUTRALITY; ALGORITHM; SELECTION; ALIGNMENT; PATTERNS; ETHIOPIA;
D O I
10.1371/journal.pone.0202303
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The large-bodied, terrestrial primates in the tribe Papionini are among the most intensely studied animals in the world, yet for some members of this tribe we know comparatively little about their evolutionary history and phylogeography. Geladas (Theropithecus gelada Ruppell, 1835), endemic primates of the Ethiopian highlands, are largely unstudied both in genetic diversity and intrageneric phylogeny. Currently, a northern and central subspecies and one isolated southern population are recognized, of which the central is classified as Least Concern, the northern as Vulnerable, and the southern is not yet assessed. The distribution and taxonomy of the subspecies remain poorly defined. Here, we estimate the mitochondrial DNA (mtDNA) diversity and phylogenetic relationships among gelada mtDNA lineages based on samples across the entire species range. We analysed 1.7 kb-long sequences of the mtDNA genome, spanning the cytochrome b gene and the hypervariable region I of the D-loop, derived from 162 faecal samples. We detected five major haplogroups or clades (south, central-1, central-2, north-1, north-2) which diverged between 0.67 and 0.43 million years ago, thus suggesting a rapid radiation, resulting in largely unresolved intrageneric phylogenetic relationships. Both, the northern and central demes contain two similarly valid haplogroups, each with little or no geographic segregation among respective haplogroups. Effective population sizes of the northern and central demes decreased during and after the last glacial maximum but remained stable for the southern deme, although on a very low level. The distribution of haplogroups within the geographic ranges of the putative gelada subspecies indicates that mtDNA sequence information does not allow reliable taxonomic inferences and thus is not sufficient for solving the taxonomic rank of the three demic populations, with the possible exception of the southern population. Nevertheless, due to the genetic differences all three populations deserve conservation efforts, in particular the smallest southern population.
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页数:18
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