Scaling theory of transport in complex biological networks

被引:153
|
作者
Gallos, Lazaros K.
Song, Chaoming
Havlin, Shlomo
Makse, Hernan A. [1 ]
机构
[1] CUNY City Coll, Levich Inst, New York, NY 10031 USA
[2] CUNY City Coll, Phys Dept, New York, NY 10031 USA
[3] Bar Ilan Univ, Minerva Ctr, IL-52900 Ramat Gan, Israel
[4] Bar Ilan Univ, Dept Phys, IL-52900 Ramat Gan, Israel
关键词
metabolic networks; modularity; protein-interaction networks;
D O I
10.1073/pnas.0700250104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Transport is an important function in many network systems and understanding its behavior on biological, social, and technological networks is crucial for a wide range of applications. However, it is a property that is not well understood in these systems, probably because of the lack of a general theoretical framework. Here, based on the finding that renormalization can be applied to bionetworks, we develop a scaling theory of transport in self-similar networks. We demonstrate the networks invariance under length scale renormalization, and we show that the problem of transport can be characterized in terms of a set of critical exponents. The scaling theory allows us to determine the influence of the modular structure on transport in metabolic and protein-interaction networks. We also generalize our theory by presenting and verifying scaling arguments for the dependence of transport on microscopic features, such as the degree of the nodes and the distance between them. Using transport concepts such as diffusion and resistance, we exploit this invariance, and we are able to explain, based on the topology of the network, recent experimental results on the broad flow distribution in metabolic networks.
引用
收藏
页码:7746 / 7751
页数:6
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