Achromobacter panacis sp nov., isolated from rhizosphere of Panax ginseng

被引:8
|
作者
Singh, Priyanka [1 ,2 ]
Kim, Yeon Ju [1 ]
Singh, Hina [1 ]
Farh, Mohamed El-Agamy [2 ]
Yang, Deok-Chun [1 ,2 ]
机构
[1] Kyung Hee Univ, Dept Oriental Med Biotechnol, Coll Life Sci, Ginseng Bank, Yongin 17104, South Korea
[2] Kyung Hee Univ, Grad Sch Biotechnol, Coll Life Sci, Yongin 17104, South Korea
关键词
Achromobacter panacis; ginseng; rhizosphere; polyphasic taxonomy; ALCALIGENES-FAECALIS; DENITRIFICANS RUGER; GEN; NOV; PIECHAUDII; YABUUCHI; SOIL;
D O I
10.1007/s12275-017-6612-3
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel strain DCY105(T) was isolated from soil collected from the rhizosphere of ginseng (Panax ginseng), in Gochang, Republic of Korea. Strain DCY105(T) is Gram-reaction-negative, white, non-motile, non-flagellate, rod-shaped and aerobic. The bacteria grow optimally at 30 degrees C, pH 6.5-7.0 and in the absence of NaCl. Phylogenetically, strain DCY105(T) is most closely related to Achromobacter marplatensis LMG 26219(T) (96.81%). The DNA G+C content of strain DCY105(T) was 64.4 mol%. Ubiquinone 8 was the major respiratory quinone, and phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol were amongst the major polar lipids. C-16:00, C(8:0)3OH and iso-C(17:0)3OH were identified as the major fatty acids present in DCY105(T). The results of physiological and biochemical tests allowed strain DCY105(T) to be differentiated phenotypically from other recognized species belonging to the genus Achromobacter. Therefore, it is suggested that the newly isolated organism represents a novel species, for which the name Achromobacter panacis sp. nov. is proposed with the type strain designated as DCY105(T) (=CCTCCAB 2015193(T) =KCTC 42751(T)).
引用
收藏
页码:428 / 434
页数:7
相关论文
共 50 条
  • [1] Achromobacter panacis sp. nov., isolated from rhizosphere of Panax ginseng
    Priyanka Singh
    Yeon Ju Kim
    Hina Singh
    Mohamed El-Agamy Farh
    Deok-Chun Yang
    [J]. Journal of Microbiology, 2017, 55 : 428 - 434
  • [2] Flavobacterium panacis sp nov., isolated from rhizosphere of Panax ginseng
    Kim, Dong Hyun
    Singh, Priyanka
    Farh, Mohamed El-Agamy
    Kim, Yeon-Ju
    Ngoc-Lan Nguyen
    Lee, Hyun A.
    Yang, Deok-Chun
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2016, 109 (09): : 1199 - 1208
  • [3] Flavobacterium panacis sp. nov., isolated from rhizosphere of Panax ginseng
    Dong Hyun Kim
    Priyanka Singh
    Mohamed El-Agamy Farh
    Yeon-Ju Kim
    Ngoc-Lan Nguyen
    Hyun A. Lee
    Deok-Chun Yang
    [J]. Antonie van Leeuwenhoek, 2016, 109 : 1199 - 1208
  • [4] Pedobacter panacis sp nov., isolated from Panax ginseng soil
    Singh, Priyanka
    Singh, Hina
    Kim, Yeon-Ju
    Yang, Deok-Chun
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2017, 110 (02): : 235 - 244
  • [5] Sphingomonas panacis sp nov., isolated from rhizosphere of rusty ginseng
    Singh, Priyanka
    Kim, Yeon-Ju
    Hoang, Van-An
    Farh, Mohamed El-Agamy
    Yang, Deok-Chun
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2015, 108 (03): : 711 - 720
  • [6] Pedobacter panacis sp. nov., isolated from Panax ginseng soil
    Priyanka Singh
    Hina Singh
    Yeon-Ju Kim
    Deok-Chun Yang
    [J]. Antonie van Leeuwenhoek, 2017, 110 : 235 - 244
  • [7] Phenylobacterium panacis sp nov., isolated from the rhizosphere of rusty mountain ginseng
    Farh, Mohamed El-Agamy
    Kim, Yeon-Ju
    Singh, Priyanka
    Van-An Hoang
    Yang, Deok-Chun
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 2691 - 2696
  • [8] Sphingomonas panacis sp. nov., isolated from rhizosphere of rusty ginseng
    Priyanka Singh
    Yeon-Ju Kim
    Van-An Hoang
    Mohamed El-Agamy Farh
    Deok-Chun Yang
    [J]. Antonie van Leeuwenhoek, 2015, 108 : 711 - 720
  • [9] Erratum to: Sphingomonas panacis sp. nov., isolated from rhizosphere of rusty ginseng
    Priyanka Singh
    Yeon-Ju Kim
    Van-An Hoang
    Mohamed El-Agamy Farh
    Deok-Chun Yang
    [J]. Antonie van Leeuwenhoek, 2016, 109 : 735 - 736
  • [10] Chryseobacterium panacis sp nov., isolated from ginseng soil
    Singh, Priyanka
    Kim, Yeon-Ju
    Farh, Mohamed El-Agamy
    Dan, Wang Dan
    Kang, Chang Ho
    Yang, Deok-Chun
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2016, 109 (02): : 187 - 196