Steady-state joint distribution for first-order stochastic reaction kinetics

被引:2
|
作者
Li, Youming [1 ,2 ]
Jiang, Da-Quan [1 ,3 ]
Jia, Chen [2 ]
机构
[1] Peking Univ, Sch Math Sci, LMAM, Beijing 100871, Peoples R China
[2] Beijing Computat Sci Res Ctr, Appl & Computat Math Div, Beijing 100193, Peoples R China
[3] Peking Univ, Ctr Stat Sci, Beijing 100871, Peoples R China
基金
中国国家自然科学基金;
关键词
CLEAVAGE; POLYPROTEIN; MECHANISM; PROTEIN;
D O I
10.1103/PhysRevE.104.024408
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
While the analytical solution for the marginal distribution of a stochastic chemical reaction network has been extensively studied, its joint distribution, i.e., the solution of a high-dimensional chemical master equation, has received much less attention. Here we develop an alternative method of computing the exact joint distributions of a wide class of first-order stochastic reaction systems in steady-state conditions. The effectiveness of our method is validated by applying it to four gene expression models of biological significance, including models with 2A peptides, nascent mRNA, gene regulation, translational bursting, and alternative splicing.
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页数:23
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