Whole genome sequencing data of native isolates of Bacillus and Trichoderma having potential biocontrol and plant growth promotion activities in rice

被引:7
|
作者
Kannan, C. [1 ]
Divya, M. [1 ]
Rekha, G. [1 ]
Barbadikar, Kalyani M. [1 ]
Maruthi, P. [1 ]
Hajira, S. K. [1 ]
Sundaram, R. M. [1 ]
机构
[1] Indian Inst Rice Res, ICAR, Hyderabad 500030, India
来源
DATA IN BRIEF | 2022年 / 41卷
关键词
Biocontrol agents; Bacillus; Trichoderma; Whole genome sequencing;
D O I
10.1016/j.dib.2022.107923
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Six native isolates of Trichoderma and Bacillus having potential for biocontrol and plant growth-promoting activities in rice were isolated from different rice growing regions of India. These isolates were screened for their efficiency in both in vitro and in vivo conditions for three years. The identity of the isolates was confirmed both by morphological and molecular characterization. Three Bacillus spp. viz., Bacillus velenzensis strain BIK2, Bacillus cabrialesii strain BIK3 and Bacillus paralicheniformis strain BIK4 and Trichoderma spp. viz., Trichoderma asperellum strain TAIK1, and T. asperellum strain TAIK5, native to the Telangana state, in Southern India except for strain TAIK4 (Rewa district in the state of Madhya Pradesh in Central India). These promising isolates were subjected for whole genome sequencing using the Illumina platform and data was presented. The data was emanated for Trichoderma asperellum (TAIK1), Trichoderma asperellum (TAIK4), Trichoderma asperellum (TAIK5), Bacillus velezensis (BIK2), Bacillus cabrialesii (BIK3) and Bacillus paralicheniformis (BIK4) isolates had an average 100X coverage of 109X, 150X and 116X; 1447X, 905X and 585X respectively. Further studies on the annotation of the data obtained in correlation with the lab and field performance of these microbes would enable them to be used in metagenomics studies to compare their performance under natural conditions with different microbiota and popular rice varieties. Bioformulation of these strains would be more appropriate with the availability of this genomic data. (C) 2022 The Authors. Published by Elsevier Inc.
引用
收藏
页数:8
相关论文
共 41 条
  • [1] Whole Genome Sequencing and Root Colonization Studies Reveal Novel Insights in the Biocontrol Potential and Growth Promotion by Bacillus subtilis MBI 600 on Cucumber
    Samaras, Anastasios
    Nikolaidis, Marios
    Antequera-Gomez, Maria Luisa
    Camara-Almiron, Jesus
    Romero, Diego
    Moschakis, Thomas
    Amoutzias, Grigoris D.
    Karaoglanidis, Georgios S.
    FRONTIERS IN MICROBIOLOGY, 2021, 11
  • [2] Plant Growth Promotion and Biocontrol of Pythium ultimum by Saline Tolerant Trichoderma Isolates under Salinity Stress
    Sanchez-Montesinos, Brenda
    Dianez, Fernando
    Moreno-Gavira, Alejandro
    Gea, Francisco J.
    Santos, Mila
    INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2019, 16 (11)
  • [3] New Strains of Trichoderma with Potential for Biocontrol and Plant Growth Promotion Improve Early Soybean Growth and Development
    Galeano, Rodrigo Mattos Silva
    Ribeiro, Joao Victor Souza
    Silva, Samanta Moncao
    Simas, Ana Lorena de Oliveira
    Guimaraes, Nelciele Cavalieri de Alencar
    Masui, Douglas Chodi
    Correa, Bianca Obes
    Giannesi, Giovana Cristina
    de Lima, Sebastiao Ferreira
    Brasil, Marivaine da Silva
    Zanoelo, Fabiana Fonseca
    JOURNAL OF PLANT GROWTH REGULATION, 2024, 43 (11) : 4099 - 4119
  • [4] The isolation, identification, whole-genome sequencing of Trichoderma brevicompactum TB2 and its effects on plant growth-promotion
    Li, Hao
    Kuerban, Zuohereguli
    Jiang, Rou
    He, Feixue
    Hu, Xiao
    Xu, Yangchun
    Dong, Caixia
    Shen, Qirong
    PLANT AND SOIL, 2025,
  • [5] Whole genome sequencing of rice endophyte Bacillus paralicheniformis NB stem 4: A potential biocontrol agent for the suppression of pearl millet blast disease
    Kushmitha, B.
    Ashraf, Suhail
    Nakkeeran, S.
    Johnson, I
    Saranya, N.
    Mahendra, K.
    Raish, Mohammad
    PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY, 2025, 138
  • [6] Whole genome sequence data of Trichoderma yunnanense strain TM10, a plant growth-promoting fungus and biocontrol agent
    Prismantoro, Dedat
    Chua, Kah-Ooi
    Teo, Kelly Wan-Ee
    Chan, Rosamond
    Jefferson, Thomas Argyarich
    Suhaimi, Nurul Shamsinah Mohd
    Mispan, Muhamad Shakirin
    Miranti, Mia
    Doni, Febri
    DATA IN BRIEF, 2025, 58
  • [7] Plant-Growth Promotion and Biocontrol Properties of Three Streptomyces spp. Isolates to Control Bacterial Rice Pathogens
    Rocio Suarez-Moreno, Zulma
    Marcela Vinchira-Villarraga, Diana
    Isabel Vergara-Morales, Diana
    Castellanos, Leonardo
    Ramos, Freddy A.
    Guarnaccia, Corrado
    Degrassi, Giuliano
    Venturi, Vittorio
    Moreno-Sarmiento, Nubia
    FRONTIERS IN MICROBIOLOGY, 2019, 10
  • [8] Complete Genome Sequence Data of Bacillus altitudinis LZP02, a Bacterium from the Rice Rhizosphere, for Studying the Promotion of Plant Growth
    Jiao, Huiwen
    Xu, Weihui
    Chen, Wenjing
    Hu, Yunlong
    Tian, Renmao
    Wang, Zhigang
    MOLECULAR PLANT-MICROBE INTERACTIONS, 2022, 35 (05) : 428 - 431
  • [9] Whole Genome Sequencing of Bacillus sp. B5-Plant Growth Promoting Rhizobacterium
    Abdurashytov, S.
    Melnichuk, T.
    Andronov, E.
    Abdurashytova, E.
    Egovtseva, A.
    Chirak, E.
    IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2020, 56 (01) : S59 - S59
  • [10] Isolation and whole genome sequencing of Pseudomonas aeruginosa strain RK1 and its biocontrol potential against phytopathogens of rice
    Jatan, Ram
    Kamboj, Richa
    Kumar, Manish
    Kumar, Nitin
    Jain, Priyanka
    Lata, Charu
    Vijayan, Joshitha
    Rai, Vandana
    Singh, Nagendra Kumar
    Bisht, Deepak Singh
    BIOLOGIA, 2023, 78 (09) : 2357 - 2369